Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0654 ATGACGAAAGATACATCAAGTGCTGATTCCCATAATACACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTCTGATCGCCATGAGATTGCTCCAATTCAAGATCAACTATCATTTGAGAAGGGTTTTTTTATAGTAATTCGTGCATGCCAAATGCTAGCGCAAAAGAACAGTGGAATAATACTGGTAGGTGTAGCAGGTCCTTCAGGGGCTGGGAAGACTGTATTTACTGAAAAAATTCTGAGCTTCATGCCCAGCATTGCAGTAATTTCGATGGATAATTACAATGATTCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGTTTAACAGACTATGACACTTTGCTCCAGAATCTACATGATTTAAAGGAAGGAAAGCCAGTCCAGGTTCCTATATATGATTTCAAGTCCAGTTCAAGAACGGGATACAGGACAGTAGAACCCCCAAGCTCCCAAATTGTGATTATAGAGGGTATCTATGCCTTGAGTGAGAAGTTGCGGCCTTTATTGGACCTTAGAGTATCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGCGACATACAACGTGCTGGTCAAGAGCCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCCTATATTGAGCCTGATCTCCAGACCGCACATATAAAAATCACAAATAAATTCAATCCGTTTACTGGATTCCAGAGCCCTACTTACATATTAAAGTCAACACGGAACTTAACAGCGGATCAAATTAAAGCTGCTCTCCCTGAAGGTTTTAAGGAAACAACAGAACAGACTTATGACATATATCTTCTGCCACCCGGTGAAGATCCAGAAACATGCCAATCATATTTACGTATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATACTCCCTTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCCTAGGATACACGATAGCTACAATTCTTAAAAGGAACAGCCATGTCTTTTCTGATGATAAGATTTGTGTAAAACTAGATTGGCTTGAGCAACTTAATCGACACTATATCCAGGTACAAGGAAGAGATCGATTAGTTGTAAAATGCATAGGTGCACAGCTGGGTCTAGAAGGTTCCTACACTCCTCGTACCTACATTGAACAAATTCAACTTGAAAAGCTTGTGGATGAGGTTATGGCCTTGCCAGATGATTTGAGGACAAAGCTCAGCCTTGATGAGGATATGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGTCTCCGCCGACAGGGTTGCCATGAGAAATAAAAATATGAGGAGTGGAATGTCACAATCATATACAAATCAAAGGGACAAAAATCTAGCCAAAGTTACTGGATATGTTGCGAACAGTCCAGAGTTTGGTGAAAGAAATTCAGATTCCTCCACAAGACCCGCAGATCAGAGAGCAATCAGTCAGCTCTCAGAACAAATTTCGGCCCTAAATGATAGAATGGATGAGTTCACGAATCGTATTGAAGAGCTGAGTGCCAAGTTAACCGTCAAGAAAAATTCTCCAACCCATCAAAGTATGTCACTTCAAGCTGAGTCCTGCAATGGATCTGCTCCCACCTCTTACTTCATCAATAGTCTAGGCAATGGTTCCCTGACTGGATCTAAAATGCCAAATCCCTCGTCTTCATCGCAATTGGCTAAAGATTCTCCTTTAATCGATGAGATATCTGGTATTACGCGTGGTCAGCGTCAGATCATGCACCAATTGGACAATCTCAGTAACCTACTCCGGGGGAGCTTGGGAGAGAAGCCTCATCAAACAAGAACCAACAGCAGGAAAAAAATTACGAATTCGGATCCGGCCGGAACTCGTCTTATGGTGGCTGTTGCAGTTGGTTGTTTGGGGGTCATCCTGGTGAAGGCATTCTGGACAAGAAATTGA 1992 0.4182 MTKDTSSADSHNTRLGLLKDQVHLVKRKDSDRHEIAPIQDQLSFEKGFFIVIRACQMLAQKNSGIILVGVAGPSGAGKTVFTEKILSFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVQVPIYDFKSSSRTGYRTVEPPSSQIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKITNKFNPFTGFQSPTYILKSTRNLTADQIKAALPEGFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDTPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDKICVKLDWLEQLNRHYIQVQGRDRLVVKCIGAQLGLEGSYTPRTYIEQIQLEKLVDEVMALPDDLRTKLSLDEDMVSSPKEALSRVSADRVAMRNKNMRSGMSQSYTNQRDKNLAKVTGYVANSPEFGERNSDSSTRPADQRAISQLSEQISALNDRMDEFTNRIEELSAKLTVKKNSPTHQSMSLQAESCNGSAPTSYFINSLGNGSLTGSKMPNPSSSSQLAKDSPLIDEISGITRGQRQIMHQLDNLSNLLRGSLGEKPHQTRTNSRKKITNSDPAGTRLMVAVAVGCLGVILVKAFWTRN 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0654 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 238 IPR027417 -
Lal22g0654 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Lal22g0654 663 Coils Coil 503 537 - -
Lal22g0654 663 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 649 - -
Lal22g0654 663 MobiDBLite consensus disorder prediction 484 502 - -
Lal22g0654 663 PANTHER URIDINE KINASE 5 649 - -
Lal22g0654 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Lal22g0654 663 PRINTS Uridine kinase signature 65 82 - -
Lal22g0654 663 PRINTS Uridine kinase signature 132 147 - -
Lal22g0654 663 PRINTS Uridine kinase signature 188 198 - -
Lal22g0654 663 PRINTS Uridine kinase signature 224 237 - -
Lal22g0654 663 CDD UMPK_like 67 239 - -
Lal22g0654 663 Gene3D - 66 247 IPR027417 -
Lal22g0654 663 MobiDBLite consensus disorder prediction 614 635 - -
Lal22g0654 663 Gene3D - 255 412 - -
Lal22g0654 663 SUPERFAMILY CYTH-like phosphatases 273 407 IPR033469 -
Lal22g0654 663 MobiDBLite consensus disorder prediction 482 502 - -
Lal22g0654 663 Pfam CYTH domain 266 403 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0654 Lal-Chr22 4652848 4659728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0654 66 236 PRT Gene Family AT4G26510 27.778 1.12e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0654 K00876 - gmx:100781286 1127.85