Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0651 ATGTTTTTACTGATCCTTCATCCAATGGAAAGGAGAAGAGATATAACTTTCTCTTGTTTAGTTTTATTCTTCTTGTGGACTTCAGTATCTGGATTGCTTTCTCCTAAAGGTGTCAACTTTGAAGTTGAGGCTCTTATGGCCATAAAGTATTCTCTAATGGATCCTCATTCTGTGTTAAGTAATTGGGATGGTGATGCTGTGGATCCATGCAGCTGGGCTATGATCACTTGTTCTTCTGATCATTTTGTTATTGCCTTAGGGATTCCAAGTCAGAATATATCTGGTACTCTCTCACCAAGCATAGGCAACTTAACAAACCTTCAGACTGTGCTTATGCAGGATAATAATATATCAGGACCAATACCCTCTGAGATTGGAAGGCTCCAAAAGCTTCAAACTCTTGATCTTTCTGACAATTTCTTCACTGGTCAACTCCCAGATTCTCTGTCCAACATGAAGGGTCTTCATTATTTGAGGATAAACAATAATAGTGTCTCTGGAACAATTCCTCCCTCTATAGCAAACATGACTCAGCTTGCTTTTCTGGATATCTCCTACAATAACTTGAGTGGACCTGTACCAAGATTAAATGCAAAAACATTCAGTATTGTAGGCAACCCCCAGATATGTGCCACTGGAATTGAGCAAAACTGTTTTAGGACAACTTTGATACCTTCTGCTATGAATAATTCTCAAGATCAACACCGTGAAGAGCTTTGCCTTGGAAACCTCAAAAAGTTCCACTTCAGAGAACTTCAAGTTGCTACAAATAACTTCTGCAGCAAGAACTTGGTTGGTAAAGGTGGTTTTGGAAATGTCTACAAAGGGTATCTCTCAGACGGTTCAGTTATAGCAGTAAAGAGGCTTAAAGATTGTAATGCTATTGGAGGTGAGATCCAATTCCAGACTGAGGTTGAAATGATCAGCTTAGCTGTTCACCGGAATCTTCTTCGGCTGTATGGATTTTGCATGACAGCTACAGAGAGGCTCTTGGTGTATCCCTACATGTCTAATGGTAGTGTTGCTTCCCGTCTTAAAGGTAATGGAAATTTCTTACTACTCTATAGACAACAGACACTCATTTATGTTTTTGCTGACACAGCCAAACCAGCTCTGGATTGGAGTACAAGAAAGAGAGTAGCATTAGGAGCTGGAAGAGGGTTGCTATATTTGCATGAGCAGTGTGACCCCAAGATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGATTATTGTGAGGCTGTGGTAGGAGATTTTGGGTTGGCAAAGCTATTGGATCACCAAGATTCACATGTTACAACAGCAGTAAGAGGTACTGTAGGGCACATAGCACCAGAGTATCTATCAACAGGACAATCCTCTGAGAAAACTGATGTGTTTGGGTTTGGAATCCTTCTACTTGAATTGATTTCTGGCCAAAGAGCTCTTGAATTTGGGAAAGCAGCAAACCAAAAAGGAGCAATGCTTGACTGGGTGAAGAAAATCCATCAAGAGAAGAAAATAGACTTGTTAGTTGATAATGACTTGAGGAACAAGTATGATAGGATAGAGCTAGATGAAATTGTTCAAGTAGCTCTTTTATGTACTCAATACCTTCCAAGCCATAGACCAAAAATGTCTGAAGTGATTAGGATGCTTGAAGGAGATGGTCTTGCAGAGAAATGGGAAGCTTCACATAGAGCTGAATCAACAAGTAGAGGAAATGAACTCTCTTCTTCAGAGCGCTATTCCGATCTTACTGATGACTCTTCATTACTTGCTCAAGCAATGGAACTTTCTGGACCAAGATGA 1800 0.4006 MFLLILHPMERRRDITFSCLVLFFLWTSVSGLLSPKGVNFEVEALMAIKYSLMDPHSVLSNWDGDAVDPCSWAMITCSSDHFVIALGIPSQNISGTLSPSIGNLTNLQTVLMQDNNISGPIPSEIGRLQKLQTLDLSDNFFTGQLPDSLSNMKGLHYLRINNNSVSGTIPPSIANMTQLAFLDISYNNLSGPVPRLNAKTFSIVGNPQICATGIEQNCFRTTLIPSAMNNSQDQHREELCLGNLKKFHFRELQVATNNFCSKNLVGKGGFGNVYKGYLSDGSVIAVKRLKDCNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLVYPYMSNGSVASRLKGNGNFLLLYRQQTLIYVFADTAKPALDWSTRKRVALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDLLVDNDLRNKYDRIELDEIVQVALLCTQYLPSHRPKMSEVIRMLEGDGLAEKWEASHRAESTSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0651 599 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 12 230 - -
Lal22g0651 599 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 232 599 - -
Lal22g0651 599 Pfam Protein tyrosine and serine/threonine kinase 263 549 IPR001245 GO:0004672|GO:0006468
Lal22g0651 599 ProSiteProfiles Protein kinase domain profile. 259 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0651 599 Gene3D Phosphorylase Kinase; domain 1 228 335 - -
Lal22g0651 599 Gene3D Ribonuclease Inhibitor 38 220 IPR032675 -
Lal22g0651 599 SUPERFAMILY L domain-like 41 243 - -
Lal22g0651 599 MobiDBLite consensus disorder prediction 560 587 - -
Lal22g0651 599 Pfam Leucine rich repeat N-terminal domain 41 78 IPR013210 -
Lal22g0651 599 SUPERFAMILY Protein kinase-like (PK-like) 238 549 IPR011009 -
Lal22g0651 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Lal22g0651 599 Gene3D Transferase(Phosphotransferase) domain 1 347 569 - -
Lal22g0651 599 SMART serkin_6 259 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0651 599 MobiDBLite consensus disorder prediction 567 587 - -
Lal22g0651 599 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Lal22g0651 599 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Lal22g0651 599 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 232 599 - -
Lal22g0651 599 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0651 Lal-Chr22 4642029 4646792 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0651 16 599 Receptor kinase-like Gene Family AT5G16000 68.421 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal22g0651 PK_Tyr_Ser-Thr 3.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0651 - - gmx:100804283 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0651 22 4642029 4646792 Lal22g0651 22 4642029 4646792 ECH