Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0596 ATGAAAATAGAAGTCTACACCACAATGCACACATTCTTCTTCTTCTTTCTTTTAAACCTAATGACCTCACATTCCCTCCTTCATCACCATAGAATCCTACACCAACCCTTCTTCCCAAAGGACACCCTCCCTCCAACTCAACCCCCAAACCCTCCACCTTCCTCTCCTTCTCCCTCCCCTTCCCTTAAACCACAATACCCAAAGTACCCTTTCTCCTCCACACCCACCACCACCACCACAACACCAACAACAACAAACTCTTCACCATTCTTCCCATTATACCCTTCTCCACCTCCCCCACCCTCTCCTTCTTCCTTTGCGTCATTCCCAGCCAACATCTCTTCCCTCATTTTCCCCCACACACCCAAACCCAAATCTTCCTCCTCCACCCTCCTCGCCGCCGCCATTACCTCCGTTGTCGCTGCCCTACTCGTGGCGGCTATATTCACCTTCGTGTACTGTCGCCGGCGAAGGAGAAACGGTTCCACTGATGACAAGACTCTTAGATCCGATTCCAGTATTCGTCTCTTCCCTCGCTCTGACAACAACGTTGAAGCTACTGGTAATGGTAACCGTAAGGTTCGCCATGCTTCTTCTATCAGTTCTGAGTTTCTCTACCTTGGCACTGTTGTAAACTCTCGTGGAATCGAAGATCTTAGTGATTCTCGTGTTAATGCATGTTCCGGTGCTGGTTTAATAAACCCTCGGAAAATGGACTCGCCGGAGTTGCAGCCACTCCCGCCGTTAGCACGGCAAAGTTCGGAGCTCCGACGAGCACGCGAGGAGGTTGTTTCGACGGCAACAGCGGAGGAGGATGAAGAGGAGTTCTACTCGCCGAAAGGGTCTATTGGTGGCGGTGGAAGCTCGAATGGAACTGGATCGGGTTCTAGAAGAGTGTTATCGGAAATGGCTGCTGAGAATTTCGTCGGTGGAAGTAGCGATTCGAGTTCGAGCTCCTTCTCTTCTTCCTCTTTTGCTTCGCCGGATCGATCTCATTCGATTAGCCTCTCGCCGCCGGTGAGTATAAGCCCTAGAAAGTCGCCGGAAAATGGTCCTCCGCCGGCACAACCACCAACTGAATCACTCGCCGTCGATGGTAGAAATTTTTTGTGTTCATCTTCACTTTCATCGCCACATGTTCAGTCACGTGCGATGTCCCCAGTTTACAACCAGCACGTGCGAGAATTTTGTTCTTCAATGTCTTCAACACCGGAGCGAGAGTGCCAATCTCAATCTCCGTTACTGTCACCGCTCTCTCTGTCACCGAACAGGGCACCGGAGAAAAACCCAGATGTAAAGGTTCAATCTTGTTGCTTATCACCGAACAAAAACGACAGCGTTTCATCGCCTCCGAGATTATCGAATGGGAGTGGAAAATCTGTGTCTTCATCTTCAGCTTTTTCTATTCCATCACAGGGGAATGTAGCAAATCATAATCATAATCAGATTTTGGATCACTCTCCAACACTATCAGATGTTTCAGATCGTTATAGGCATTATCCACTTTCATCATTACCACTATCACCATCGTTGCTTTCATCTCCAGAAACAGAACTGGACTCGAACCCAAACCCGAACCATGCTTCGAATCAATCACAAAGAAAGCATTGGGTGATTCCCGACCTATTGACACCACCCATTGCTGAATTAGTTACAGTTGAAAATGTTCCTACAAGGAAACAATGGGAGATTCCGGTTTTGCCAACACTTGTTGTGTCATCCATTAGAGTTTCAGCTCCTGCTACTTCTGCTCCTCCGGCACCACCTCCACTGCCGCCTCCACCTCCTGTGTCGCGACAGCGAAAACAATGGGAGGTGCCTGCTGCTTCTTCGTCGATGCCTGTTGGACAAGTGATTTCGAGGCCGCCTGAACTAATGCCGCCTTCGAGGCCTTTTGTGTTGCAAACCCCAACAACAAAGATTTCTCCTGTTGAGTTGCCACAGAGTTTGGGAGTGATTGAAGAGAGTCCCAATGAGGCATCTAAGCCAAAGTTGAAGCCTTTGCATTGGGATAAAGTTAGGGCCAGCTCTGGTCGTGAAATGGTTTGGGATCACTTGGGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATCGAAACTTTGTTTGTAGTGAACACACCAAACCCAAAACCTAAGGATAATACCTCACACTCGGTTCTTACCCCACCAAGTCAGGAGGACAGGGTACTAGATCCTAAGAAGTCCCAAAATATTGCTATCTCGCTAAGAGCGCTTAATGTGACTATAGAAGAAGTATGTGAAGCACTGTTAGAAGATTATGTGACTACATCACTTTACCGCTCTACAGGTATAACTGATACACTTGGAATGGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAACAAGGAAGAAGAACGTAAGTTGAAGGAACATAAAGAGGACTCGCCAGCCAAGCTTGGTCCTGCTGAGAAATTTTTAAAGGCAGTTCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTATGTAGCCAATTTTGAGTCAGAAGTGGAGTATCTTAGAAAATCATTTCAAACTCTGGAGGAGGCCAAGCACACTCCAATAAATATGTCTGTATTTGCTTTCTATAGGAGGTTTCACGTTGCATGTGAAGAGCTGCGAAACAATAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAATCGCATGAACGTGGGGACAAACCGTGGTGATGCAAATGCCTTCAAGCTTGATACACTTCTCAAGCTGATTGATGTCAAAGGTGCAGATGGTAAAACCACCCTACTGCATTTCGTGGTACAGGAAATTATTAGAACTGAAGGTGCCCGTCTCTCTGAAACTAATCAAATTCCAAGCACAACTTCGAGTGACGATGCCAAGTGTAGGGGGTTTGGTCTACAAGTAGTCTCTAGTCTATGTTCGGATCTAGGAAGTGTGAAGATGGCCGCTACTATGGATTCTGAAGTTCTCAGCAACGAGGTCTCTAAACTTTCAAACGGAATTGCACATATTGCAGAGGTTGTGCAATTAATTGAGACAGAATGTTCAAATGAAAGCAAACAGAAGTTCACAGAATCAATGCACAAATTCATGAGAATAGCTGAGGAGGAGATTCTAAGAATTCAAACCCAAGAAAGTGTCGCTTTATCCCTCGTGAAGGAGATTACAGAATACTTCCATGGTAACTTGTCTAAGGAAGAATCACATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGACAAGGTATGTAAAGAAGTTGGTATGGTAAATGAGAGAACCACGGCTAGTTCTGCGCATAGATTCCCCGTTCCAGTGAACCCTTTGCTTCCACAACCCCTTAACCCCATGCTTCCTCAACCCCTTCCCGGGCTATACGTAAATCAACAGTATAGCTCTTCAGATGATGATAGTGCATCTCCTTAG 3438 0.461 MKIEVYTTMHTFFFFFLLNLMTSHSLLHHHRILHQPFFPKDTLPPTQPPNPPPSSPSPSPSLKPQYPKYPFSSTPTTTTTTPTTTNSSPFFPLYPSPPPPPSPSSFASFPANISSLIFPHTPKPKSSSSTLLAAAITSVVAALLVAAIFTFVYCRRRRRNGSTDDKTLRSDSSIRLFPRSDNNVEATGNGNRKVRHASSISSEFLYLGTVVNSRGIEDLSDSRVNACSGAGLINPRKMDSPELQPLPPLARQSSELRRAREEVVSTATAEEDEEEFYSPKGSIGGGGSSNGTGSGSRRVLSEMAAENFVGGSSDSSSSSFSSSSFASPDRSHSISLSPPVSISPRKSPENGPPPAQPPTESLAVDGRNFLCSSSLSSPHVQSRAMSPVYNQHVREFCSSMSSTPERECQSQSPLLSPLSLSPNRAPEKNPDVKVQSCCLSPNKNDSVSSPPRLSNGSGKSVSSSSAFSIPSQGNVANHNHNQILDHSPTLSDVSDRYRHYPLSSLPLSPSLLSSPETELDSNPNPNHASNQSQRKHWVIPDLLTPPIAELVTVENVPTRKQWEIPVLPTLVVSSIRVSAPATSAPPAPPPLPPPPPVSRQRKQWEVPAASSSMPVGQVISRPPELMPPSRPFVLQTPTTKISPVELPQSLGVIEESPNEASKPKLKPLHWDKVRASSGREMVWDHLGSSSFKLNEEMIETLFVVNTPNPKPKDNTSHSVLTPPSQEDRVLDPKKSQNIAISLRALNVTIEEVCEALLEDYVTTSLYRSTGITDTLGMELLESLLKMAPNKEEERKLKEHKEDSPAKLGPAEKFLKAVLDVPFAFKRVEAMLYVANFESEVEYLRKSFQTLEEAKHTPINMSVFAFYRRFHVACEELRNNRMFLKLLEAVLKTGNRMNVGTNRGDANAFKLDTLLKLIDVKGADGKTTLLHFVVQEIIRTEGARLSETNQIPSTTSSDDAKCRGFGLQVVSSLCSDLGSVKMAATMDSEVLSNEVSKLSNGIAHIAEVVQLIETECSNESKQKFTESMHKFMRIAEEEILRIQTQESVALSLVKEITEYFHGNLSKEESHPFRIFMVVRDFLTVLDKVCKEVGMVNERTTASSAHRFPVPVNPLLPQPLNPMLPQPLPGLYVNQQYSSSDDDSASP 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0596 1145 MobiDBLite consensus disorder prediction 506 534 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 399 423 - -
Lal22g0596 1145 SUPERFAMILY Formin homology 2 domain (FH2 domain) 585 1095 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 707 723 - -
Lal22g0596 1145 CDD TM_EGFR-like 125 160 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 38 105 - -
Lal22g0596 1145 ProSiteProfiles Formin homology-2 (FH2) domain profile. 655 1110 IPR015425 -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 308 344 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 66 90 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 399 489 - -
Lal22g0596 1145 SMART it6_source 655 1099 IPR015425 -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 582 600 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 706 731 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 41 65 - -
Lal22g0596 1145 Gene3D Formin, FH2 domain 649 1094 IPR042201 -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 283 297 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 435 489 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 91 105 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 505 534 - -
Lal22g0596 1145 PANTHER FORMIN-LIKE PROTEIN 1 12 1145 - -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 580 600 - -
Lal22g0596 1145 PANTHER FORMIN-RELATED 12 1145 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal22g0596 1145 MobiDBLite consensus disorder prediction 231 367 - -
Lal22g0596 1145 Pfam Formin Homology 2 Domain 870 1084 IPR015425 -
Lal22g0596 1145 Pfam Formin Homology 2 Domain 658 853 IPR015425 -
Lal22g0596 1145 MobiDBLite consensus disorder prediction 345 359 - -
Lal22g0596 1145 Coils Coil 833 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0596 Lal-Chr22 4198893 4203224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0596 616 1134 FH2 protein (formin) Gene Family AT3G25500 67.366 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0596 - - gmx:100800333 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0660 6 4346290 4350967 Lal22g0596 22 4198893 4203224 LSH
Lal22g0596 22 4198893 4203224 Lal18g1028 18 13264981 13269611 LSH