Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0586 ATGGAAGGTAACTTGAAGTTGGAACAAGTTGGTCTCATCAGTGACCTAATGCAAGGGAAGGAGCTAGCAAAGAAGTTACATGACCTTATGTTCTCATCATCATCATCAACATCTCATGAAACCAAAGAAGTTTTACTTGATAAAATATTTGTGTCTTATGAGAAAGCACTCACCAAACTAAACTGGGAGGCTAATGTGGGAGAGGAAGATACAAAGATCACCATTTTCAAGATGATGGATTCTCCTTGTTCCTTTACAAATGAGAGCCCTAGAGGAGAGGTCTTTAACCAAGAGGTTAAGCACAAAAATGTCTCCAAGAAAAGAAAGACCATGGACAGTTGGACAAAACAAATGAAGGTTTGCCCAGGAACAGTGCTTGATGGGTCTCTAGGTGATGGTTATAACTGGAGAAAATATGGACAGAAAGATATTCTGGGAGCAAAGTTTCCAAGAACATTCAAGTATGTTTCATATGTTTTTTCATCAGGAAAGCTTGTTAGTTTTTGGCATTTGAATATGAAAGACATGGGATATTACAGATGTACACATAGACATGCACAAGGGTGTCTAGCCACAAAGCAAGTGCAAAAGTCAGATGAAGAAACAACATATGAAATAACCTACAAAGGAAGACACACATGCATCCAATCTAGTCATGCAAAAAAGGCATTCCCATCAAAATCAAAGATTTGCATTGGAGAAAATAAACACCACAACCACCAAAAGAAGATAGCACTAGAAGAGAAGAAAATAGAACAACAACAAACTCAGGACACAGCTTTCACTTTTGGCCCAGAGCTTGAAGTTAAAATAGACTTGGAAAACAAGGAAGATATTTTCCCATCATTTTTCTTTCCTTCTCCATCAATAGGGTCAGAAACAATGATTGAAAACCATTTCACAGAAAGCTTTTCTCCTGCATTCTTATCACCATCTACTTCAGAATCAAACATTTTCTGTTTGTCACCATGCAACTTTGGAAGCATTGGACTAGGCCTAAGTGTGCAAACATCAGAATCTGATATCACTGATATAGTGTCAGCCACAACTTCAGTTAACAATTCTCCAATAGCAAACTTGGATGATCTTGATCTCTTCTTTGATAATGTGGATTTTGACACAGATTTCCCAATCAACACTCCTGAATATTTCACTTTATAA 1161 0.373 MEGNLKLEQVGLISDLMQGKELAKKLHDLMFSSSSSTSHETKEVLLDKIFVSYEKALTKLNWEANVGEEDTKITIFKMMDSPCSFTNESPRGEVFNQEVKHKNVSKKRKTMDSWTKQMKVCPGTVLDGSLGDGYNWRKYGQKDILGAKFPRTFKYVSYVFSSGKLVSFWHLNMKDMGYYRCTHRHAQGCLATKQVQKSDEETTYEITYKGRHTCIQSSHAKKAFPSKSKICIGENKHHNHQKKIALEEKKIEQQQTQDTAFTFGPELEVKIDLENKEDIFPSFFFPSPSIGSETMIENHFTESFSPAFLSPSTSESNIFCLSPCNFGSIGLGLSVQTSESDITDIVSATTSVNNSPIANLDDLDLFFDNVDFDTDFPINTPEYFTL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0586 386 SUPERFAMILY WRKY DNA-binding domain 129 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 Pfam WRKY DNA -binding domain 132 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 Pfam WRKY DNA -binding domain 176 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 Gene3D WRKY domain 124 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 Coils Coil 237 257 - -
Lal22g0586 386 ProSiteProfiles WRKY domain profile. 130 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 SUPERFAMILY WRKY DNA-binding domain 176 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 SMART WRKY_cls 130 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal22g0586 386 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 153 - -
Lal22g0586 386 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 177 379 - -
Lal22g0586 386 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 153 IPR044810 GO:0003700
Lal22g0586 386 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 177 379 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0586 Lal-Chr22 4068719 4072127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0586 1 284 WRKY Transcription Factor Family AT4G23810 32.602 1.90e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal22g0586 WRKY 8.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0586 - - aprc:113849885 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0649 6 4239604 4242756 Lal22g0586 22 4068719 4072127 LSH