Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal22g0586 | ATGGAAGGTAACTTGAAGTTGGAACAAGTTGGTCTCATCAGTGACCTAATGCAAGGGAAGGAGCTAGCAAAGAAGTTACATGACCTTATGTTCTCATCATCATCATCAACATCTCATGAAACCAAAGAAGTTTTACTTGATAAAATATTTGTGTCTTATGAGAAAGCACTCACCAAACTAAACTGGGAGGCTAATGTGGGAGAGGAAGATACAAAGATCACCATTTTCAAGATGATGGATTCTCCTTGTTCCTTTACAAATGAGAGCCCTAGAGGAGAGGTCTTTAACCAAGAGGTTAAGCACAAAAATGTCTCCAAGAAAAGAAAGACCATGGACAGTTGGACAAAACAAATGAAGGTTTGCCCAGGAACAGTGCTTGATGGGTCTCTAGGTGATGGTTATAACTGGAGAAAATATGGACAGAAAGATATTCTGGGAGCAAAGTTTCCAAGAACATTCAAGTATGTTTCATATGTTTTTTCATCAGGAAAGCTTGTTAGTTTTTGGCATTTGAATATGAAAGACATGGGATATTACAGATGTACACATAGACATGCACAAGGGTGTCTAGCCACAAAGCAAGTGCAAAAGTCAGATGAAGAAACAACATATGAAATAACCTACAAAGGAAGACACACATGCATCCAATCTAGTCATGCAAAAAAGGCATTCCCATCAAAATCAAAGATTTGCATTGGAGAAAATAAACACCACAACCACCAAAAGAAGATAGCACTAGAAGAGAAGAAAATAGAACAACAACAAACTCAGGACACAGCTTTCACTTTTGGCCCAGAGCTTGAAGTTAAAATAGACTTGGAAAACAAGGAAGATATTTTCCCATCATTTTTCTTTCCTTCTCCATCAATAGGGTCAGAAACAATGATTGAAAACCATTTCACAGAAAGCTTTTCTCCTGCATTCTTATCACCATCTACTTCAGAATCAAACATTTTCTGTTTGTCACCATGCAACTTTGGAAGCATTGGACTAGGCCTAAGTGTGCAAACATCAGAATCTGATATCACTGATATAGTGTCAGCCACAACTTCAGTTAACAATTCTCCAATAGCAAACTTGGATGATCTTGATCTCTTCTTTGATAATGTGGATTTTGACACAGATTTCCCAATCAACACTCCTGAATATTTCACTTTATAA | 1161 | 0.373 | MEGNLKLEQVGLISDLMQGKELAKKLHDLMFSSSSSTSHETKEVLLDKIFVSYEKALTKLNWEANVGEEDTKITIFKMMDSPCSFTNESPRGEVFNQEVKHKNVSKKRKTMDSWTKQMKVCPGTVLDGSLGDGYNWRKYGQKDILGAKFPRTFKYVSYVFSSGKLVSFWHLNMKDMGYYRCTHRHAQGCLATKQVQKSDEETTYEITYKGRHTCIQSSHAKKAFPSKSKICIGENKHHNHQKKIALEEKKIEQQQTQDTAFTFGPELEVKIDLENKEDIFPSFFFPSPSIGSETMIENHFTESFSPAFLSPSTSESNIFCLSPCNFGSIGLGLSVQTSESDITDIVSATTSVNNSPIANLDDLDLFFDNVDFDTDFPINTPEYFTL | 386 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal22g0586 | 386 | SUPERFAMILY | WRKY DNA-binding domain | 129 | 153 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | Pfam | WRKY DNA -binding domain | 132 | 153 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | Pfam | WRKY DNA -binding domain | 176 | 214 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | Gene3D | WRKY domain | 124 | 216 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | Coils | Coil | 237 | 257 | - | - | |
Lal22g0586 | 386 | ProSiteProfiles | WRKY domain profile. | 130 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | SUPERFAMILY | WRKY DNA-binding domain | 176 | 214 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | SMART | WRKY_cls | 130 | 216 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal22g0586 | 386 | PANTHER | WRKY TRANSCRIPTION FACTOR 41-RELATED | 1 | 153 | - | - | |
Lal22g0586 | 386 | PANTHER | WRKY TRANSCRIPTION FACTOR 41-RELATED | 177 | 379 | - | - | |
Lal22g0586 | 386 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 153 | IPR044810 | GO:0003700 | |
Lal22g0586 | 386 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 177 | 379 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal22g0586 | Lal-Chr22 | 4068719 | 4072127 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal22g0586 | 1 | 284 | WRKY Transcription Factor Family | AT4G23810 | 32.602 | 1.90e-35 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lal22g0586 | WRKY | 8.3e-11 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal22g0586 | - | - | aprc:113849885 | 413.69 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal6g0649 | 6 | 4239604 | 4242756 | Lal22g0586 | 22 | 4068719 | 4072127 | LSH |