Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0562 ATGGCTTCAGATTCCAAAACTTTTACTTTTGATGAGGTGGCTAAGCACAACAATGCAAAGGATTGCTGGATTATAATCAATGGAAAGCTTGAATTGCTATTTGATCGCCTGCGTCCTTGTTTTCATGTTGACCACCTTGATCTTAAAGAAAGAGTATATGATGTCACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGCTTTGGTGACAGCTACAGCTAAAGATGCCACCATTGATTTTGAAGATATTGGCCATAGTGACTCTGCGATAGAGGATATGAAAAAATACTATGTTGGTGATGTTGACATCAACACTCTTCCAGCAAACGTTGAGAAAAGTAAAACACCACTTATAAGAGAAGTTGGTGCCTCTAGCAACAATGAATCTTCTGGATTTGTTGTGAAGATCTTGCAATTTGTGCTGCCATTGCTGATATTGGGTTTTGCATTTGCTCTGCAGTACTATGGTAAAAGTAGCAAGCCCAATGATTCATGA 498 0.3916 MASDSKTFTFDEVAKHNNAKDCWIIINGKLELLFDRLRPCFHVDHLDLKERVYDVTPFLDDHPGGDEALVTATAKDATIDFEDIGHSDSAIEDMKKYYVGDVDINTLPANVEKSKTPLIREVGASSNNESSGFVVKILQFVLPLLILGFAFALQYYGKSSKPNDS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0562 165 Pfam Cytochrome b5-like Heme/Steroid binding domain 49 102 IPR001199 -
Lal22g0562 165 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 58 65 IPR018506 GO:0020037
Lal22g0562 165 PANTHER CYTOCHROME B5 ISOFORM C 49 160 - -
Lal22g0562 165 PANTHER CYTOCHROME B5 ISOFORM C 1 30 - -
Lal22g0562 165 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 49 107 IPR036400 -
Lal22g0562 165 PRINTS Cytochrome B5 signature 52 62 IPR001199 -
Lal22g0562 165 PRINTS Cytochrome B5 signature 62 76 IPR001199 -
Lal22g0562 165 PRINTS Cytochrome B5 signature 77 84 IPR001199 -
Lal22g0562 165 PRINTS Cytochrome B5 signature 90 102 IPR001199 -
Lal22g0562 165 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 103 IPR001199 -
Lal22g0562 165 PANTHER CYTOCHROME B5 1 30 - -
Lal22g0562 165 PANTHER CYTOCHROME B5 49 160 - -
Lal22g0562 165 Gene3D - 2 105 IPR036400 -
Lal22g0562 165 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 29 IPR036400 -
Lal22g0562 165 SMART Cyt_b5_2 8 103 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0562 Lal-Chr22 3844756 3848758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0562 1 163 NADPH P450 reductases AT5G48810 46.626 4.79e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0562 K23490 - gmx:100500069 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0619 6 4015273 4017311 Lal22g0562 22 3844756 3848758 LSH