Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0560 ATGACAACCAACGTTGATAACCTCTGGGTGCTAGCCGTAGCCTCCAAATGCACACAAGAAAACATTGCATGGTTACTTTTGATCATGGCCACACTCTGGTTAACCATGACTCTATTTCACTGGTCACATCCTGGTGGTCCTGCTTGGGGTAAGTACTACTCCACATGGAGAAAAACAACAAAATCATCATCATCATCCTCAACTTCACACCATATAGACTCCATGATTATTCCTGGTCCCAAAGGGTACCCTTTAATTGGAAGCATGAACCTCATGACTTCTCTCGCACATCACCGTTTAGCAGATGCTGCTAAAACATGCAACGCAACGAGGCTCATGGCGTTTAGTCTAGGTAACACATGTGCCATAATCACGTGCCACCCTGATGTTGCTAAAGAGATTCTCAACAGTTCTGTTTTCGCTGACCGACCTGTTAAAGAATCAGCTTATAGTCTCATGTTCAATCGTGCAATCGGTTTCGCTCCCTACGGTGTTTATTGGAGAACTTTAAGGAGAATCGCAGCCACTCATCTTTTTTGTCCTAAGCAAATCAAAGCTTCTGAGATTCAGAGAAATGAAATCGCCACCCAGATGATTGAATTCTTTAGAAACCGCCATAACGATGGCGGTTGTGTAAGACAAGTTCTTAAGAGAGCTTCGTTGAGTAACATGATGTGGTCGGTGTTTGGACAGAGGTACGAGGAGAACAGTAGCATGGAAGAGGAGTTAAGTGGGTTAGTGGAACAAGGGTATGACCTTTTGGGTACCCTTAATTGGGGTGACCACCTTCCTTGGCTTAAAGACTTTGACTTACAAAAAATTCGGTTCACTTGCTCCAAACTTGTTCCAAAGGTAAACCGCTTTGTCGGTTCAATCATCGCTGACCATCGAGCCCACACAACACAATCTAACCGAGATTTCGTTCATGTCTTGCTCTCTCTCCATGGTCCAGATAAACTGTCTGATCCCGACATCATTGCTGTACTTTGGGAAATGATATTTCGGGGGACCGACACGGTAGCTGTTTTAATAGAGTGGATATTAGCAAGAATGGTGATACATCAGGATGTGCAGCATAAGGTGCAAGAGGAGCTGGATACGGTGGTGCGTGGTGGTTCACGCGCTTTGACGGAAGATGACATGACGGCGATGATATATCTTCCGGCCGTGGTGAAGGAGGTGCTAAGGCTTCACCCACCAGGCCCACTCCTCTCCTGGGCCCGCTTGGCCATAACTGATACGACAATTGATGGGTATCATGTGCCTGCAGGGACCACAGCTATGGTTAATATGTGGGCCATATCAAGGGACCCAAATGTGTGGAGGGACCCACTTGAGTTTATGCCTGAGAGGTTCGTGGCTGGTGAAGGACAACCTGAGTTTTCTATTCTAGGATCGGATCTAAGGTTGGCTCCGTTTGGGTCTGGAAGGAGAACTTGCCCTGGGAAGAGTTTGGGTTTGGCTACTGTAAACTTTTGGGTGGCTAGGCTCTTGCATGAGTTTGAGTTTCTACCGAATGATGGTGACAAGAATGGTGTTGATCTAACAGAAGTGCTTAGGCTCTCTTGTGAAATGGCTAACCCTCTAACTGTTAAGGTGCGCCCAAGGCGTGGGTTAAGCTTATGTAAGTTATGTTGA 1638 0.4634 MTTNVDNLWVLAVASKCTQENIAWLLLIMATLWLTMTLFHWSHPGGPAWGKYYSTWRKTTKSSSSSSTSHHIDSMIIPGPKGYPLIGSMNLMTSLAHHRLADAAKTCNATRLMAFSLGNTCAIITCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRNEIATQMIEFFRNRHNDGGCVRQVLKRASLSNMMWSVFGQRYEENSSMEEELSGLVEQGYDLLGTLNWGDHLPWLKDFDLQKIRFTCSKLVPKVNRFVGSIIADHRAHTTQSNRDFVHVLLSLHGPDKLSDPDIIAVLWEMIFRGTDTVAVLIEWILARMVIHQDVQHKVQEELDTVVRGGSRALTEDDMTAMIYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAISRDPNVWRDPLEFMPERFVAGEGQPEFSILGSDLRLAPFGSGRRTCPGKSLGLATVNFWVARLLHEFEFLPNDGDKNGVDLTEVLRLSCEMANPLTVKVRPRRGLSLCKLC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0560 545 Pfam Cytochrome P450 78 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 SUPERFAMILY Cytochrome P450 77 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Lal22g0560 545 PANTHER CYTOCHROME P450 78A6 1 538 - -
Lal22g0560 545 Gene3D Cytochrome P450 64 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal22g0560 545 PANTHER CYTOCHROME P450 78A7-RELATED 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0560 Lal-Chr22 3826329 3830419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0560 1 537 Cytochrome P450 AT2G46660 66.605 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0560 K20619 - gmx:100798388 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0560 22 3826329 3830419 Lal22g0560 22 3826329 3830419 ECH
Lal6g0618 6 4001548 4003732 Lal22g0560 22 3826329 3830419 LSH
Lal22g0560 22 3826329 3830419 Lal18g1050 18 13499584 13501833 LSH