Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0555 ATGCAGCAGACACCGCAAATGATTCCTGTGATGCCTTCATTCTCACCTACAAGCATAACCACCGAGCAGATTCAAAAGGGTGCCTCCAAACCGCGGAAAACGACTGCAATGGAACAGTGTCGTGGCCGCAATGGAACAGATTTGCGGCCACAACAGACAAGACGAAGTAGGATTTGGTTCTTAATCTCTGGAAATGAGAAGGTTGTTGGTTGTGCTTATCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCTGAATGTGCCCAGTATCAAGCTCAGCTTCAAAAAAATTTGATGTATTTAGCAGCAATTGCTGATGCCCAGCCACAAACACCAACCATGCCTCCACAGATGGCGCCACACCCTGCGATGCAACAAGGTTTCTATATGCAACATCCTCAGGCTGCAGCAATGGCTCAGCAACCAGGACTTTTCCCCCAAAAGATGCCATTGCAATTCGGTAACCCACATCAAATGACGCAACAGCAGCAGCAGCAGCTTCACCAGCAGCACCAGCAGGCCATCCAAGGACAAATGGGACTCAGACCTGGAGGGCCTAATAGTGGCATGCACAGCGAGGCTGCTCTTGGAGGTGGCAGTGGTGGTGGTCCACCTTCAGCCACTGGTCCAAATGATGCACGTGGCGGAAGCAAACAAGATGCTTCCGATGCTGGGGCAACTGGTGGAGATGGCCAAGGAAGCTCTGCCGCTACACATAACAGTGGAGATGGTGAATCATCTTATCTGAAGGGGTCAGAAGAAGCAAAGTGA 798 0.4962 MQQTPQMIPVMPSFSPTSITTEQIQKGASKPRKTTAMEQCRGRNGTDLRPQQTRRSRIWFLISGNEKVVGCAYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPTMPPQMAPHPAMQQGFYMQHPQAAAMAQQPGLFPQKMPLQFGNPHQMTQQQQQQLHQQHQQAIQGQMGLRPGGPNSGMHSEAALGGGSGGGPPSATGPNDARGGSKQDASDAGATGGDGQGSSAATHNSGDGESSYLKGSEEAK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0555 265 PANTHER GRF1-INTERACTING FACTOR 2-LIKE 73 227 - -
Lal22g0555 265 MobiDBLite consensus disorder prediction 1 51 - -
Lal22g0555 265 Pfam SSXT protein (N-terminal region) 74 120 IPR007726 -
Lal22g0555 265 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 73 227 IPR044779 GO:0003713
Lal22g0555 265 MobiDBLite consensus disorder prediction 155 265 - -
Lal22g0555 265 MobiDBLite consensus disorder prediction 1 32 - -
Lal22g0555 265 MobiDBLite consensus disorder prediction 162 186 - -
Lal22g0555 265 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0555 Lal-Chr22 3769700 3773921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0555 - - vun:114167142 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0555 22 3769700 3773921 Lal22g0555 22 3769700 3773921 ECH
Lal6g0613 6 3949360 3953998 Lal22g0555 22 3769700 3773921 LSH
Lal22g0555 22 3769700 3773921 Lal18g1055 18 13576972 13586443 LSH