Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0554 ATGAGCAAAAAGGCACCGAAACCTCGTACTCGTGTAGGGAAGTACGAGTTGGGAAAAACTATTGGTGAAGGAAGCTTTGCAAAGGTTAAACTAGCCAGGAATGTTGATTCTCACGACCATGTTGCTATCAAAATCCTCGACCGTAACCATGTTCTCCGCCATAACATGATGGAGCAGCTGAAGAAAGAAATTTCAGCCATGAAGCTGATCAATCATCCAAACGTTGTCAAAATATTTGAGGTTATGGCAAGCAAAACAAAGATTTACATTGTATTGGAGTTGGTTAATGGAGGAGAATTATTTGACAAAATTGCCACAAATGGGAAACTAAAAGAGGATGAAGCAAGAAGTTATTTCCACCAACTAATCAATGCAGTTGATTATTGCCATAGTAGAGGCGTGTATCACCGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACTTACGCGCAGCAAGAGGATGAACTTCTCCGCACTGCATGTGGAACCCCGAATTATGTTGCTCCTGAGGTGCTTAAGGATAGAGGCTATGTTGGTTCTGCATCTGATATTTGGTCTTGTGGAGTCATTCTCTTTGTACTAATGGCTGGGTACTTGCCTTTTGATGAGCCAAATCATATAGCATTATTCCGTAAAATTAGCAAAGCTGATTTCAGTTGTCCATCATGGTTTGCGCCCGAGTTAAAGAAACTTCTGAAGCGTATTCTTGACCCAAACCCTCTTACAAGGATAAAAATAGAAGAACTCTTGGAAGATGAATGGTTCAAGAAAGGATACAAGCCAGCATCTTTTACAGAGGAAGAGGATGTAAACGTTGATGACGTAGCGGCTGCTTTCAACGATTCTAAGGAAAATCTAGTGACAGAGAGAAAAGAGAAACCCGTCTCGATGAATGCTTTTGAGCTCATTTCTAGGTCACAAAGCTTCAATCTTAATAGCTTGTTTGAGAAGCAAACAGGGGTTGTAAAGCGAGAAACACATTTTACTTCACAGCACCCTGCTAATGAAATCATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTAGGCTTTAATGTTCACAAGCGAGATTATAAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGTCATCTTTCAGTGGCTACTGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACTGGTGGCGACACACTTGAGTTTCACAAGTTTTACAAGAACTTCTCATCAGGGTTGCAAGATGTAGTGTGGCATGCAGACGAAGAAAAATGA 1308 0.4151 MSKKAPKPRTRVGKYELGKTIGEGSFAKVKLARNVDSHDHVAIKILDRNHVLRHNMMEQLKKEISAMKLINHPNVVKIFEVMASKTKIYIVLELVNGGELFDKIATNGKLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVSDFGLSTYAQQEDELLRTACGTPNYVAPEVLKDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNHIALFRKISKADFSCPSWFAPELKKLLKRILDPNPLTRIKIEELLEDEWFKKGYKPASFTEEEDVNVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLNSLFEKQTGVVKRETHFTSQHPANEIMSKIEEAAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDVVWHADEEK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0554 435 CDD CIPK_C 311 424 - -
Lal22g0554 435 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal22g0554 435 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 6 431 - -
Lal22g0554 435 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0554 435 PANTHER - 6 431 - -
Lal22g0554 435 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Lal22g0554 435 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Lal22g0554 435 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Lal22g0554 435 Gene3D Kinase associated domain 1, KA1 304 430 - -
Lal22g0554 435 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0554 435 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0554 435 SUPERFAMILY Protein kinase-like (PK-like) 12 323 IPR011009 -
Lal22g0554 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lal22g0554 435 Pfam NAF domain 307 367 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0554 Lal-Chr22 3757319 3764626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0554 3 432 CBL-interacting serine-threonine protein kinases AT1G01140 74.600 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal22g0554 Pkinase 6.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0554 - - gmx:100794136 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0554 22 3757319 3764626 Lal22g0554 22 3757319 3764626 ECH
Lal6g0612 6 3939645 3943711 Lal22g0554 22 3757319 3764626 LSH