Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0548 ATGGATTTATCAGCCATGCCCAAACCCTTCTCCAATCAACACAATTGGTACCTAGCCACTCTTTCTTCTGCACTAAACAATTCTGAATTCACAACCAATAATCTTAACTCTTATTCTTCTAAGCATATTTACACTTACACCAATGTCATGAATGGTTTCAGTGCAAGTTTGACACCTTTAGAACTTGAAGCTTTAAAAAGCTCTCCAGGTTATATTTCATACATAAGAGACTTGCCTGTGAAACCAGACACTACACACTCACCCCAATTCCTTGGCCTCAATCCCTTTTCAGGAGCATGGCCAGCCTCAAAGTATGGCAAAGATGTAATTATTGGTGTGTTGGACACTGGAGTGTGGCCAGAGAGTGAAAGCTTTAAAGATTATGGACTAACTAACATTCCTTCAAGATGGAAAGGCCAATGTGAAAACAGCATCCAATTCAATTCATCACTTTGCAACAACAAACTCATTGGAGCTAAGTTCTTTAACAAAGGACTACTTGCCAAGAACCCAAACATCACCATAGCGAAGTATAACTCGACGCGCGACACCGATGGTCATGGGACTCATACTTCAAGTACTGCAGCTGGAAGCCAAGTTAATGATGTGTCCTACTTTGGCTATGCAAGTGGAACAGCAAGAGGAATAGCTTCGTCGGCGCGTGTAGCTATGTACAAAATCTTATGGGAAATTGGAGGGTACCCTTCTGATATAATAGCTGCAATTGATAGTGCAATACAAGATGGTGTAGATGTTCTTTCATTATCATTTGGTTTTGATGAAACACGTTTGTATGAAGACCCTGTTGCTATTGCAACTTTTGCAGCCATGGAGAGAGGCATTTTTGTGTCTACATCAGCAGGGAATGAAGGGCCTTATCTTGAAACTCTACATAATGGAACACCATGGGTTATAACTGCTGCTGCTAGCACTTTGGATCGCGAATTTCACGGGACTCTTTCTCTTGGAAATTCAGTCCAAATCACTGGCTTGTCTCTTTATATATTCGACTTCTCTGTTGATCATGTTCCAATTGTTTTTATGGGGCTGTGCAACAATTTGAGGCAACTAGTCAAAGTGAGGAACAAGATTGTGGTGTGTGAAGACAAGAATGAAACACTTCCAGACCAAGTATCAAATGTTGAAACTGCACAAGTTGTTGGTGCTGTTTTTATATCAAACAGCTCTGACTTATATGAATTCTACTTACAGAACAGTTTCCCTTCCATCATTATTAGTCCCATAGATGGTGAAATTGTCAAATTTTACATAAAGAGTAATAAACTTTATGCAAAAGCAAGCATGTCTTTTAAGATAACTGCTGTTGGTAAAAAACCAGCACCAAGTGTGGATAGTTATAGTTCTAGAGGGCCATCATATAGTTGTCCCTATGTATTGAAACCAGACATCACAGCTCCTGGTACATCAATCTTAGCTGCATGGCCTAAAAATGTTCCAGCAACAATTTTGGGGTCCAAAAATATCTTTAGCAACTTCAACTTGTTAAGTGGTACATCTATGTCATGCCCTCATGTTACAGGTGTAGCAGCCCTTTTGAAGGGTGCATACCCTCATTGGAGCCCTGCAGCAATTCGGTCAGCTATTATGACAACTTCAGATATATTGGATAATACATTGGAACACATCAAAGACATTGGTCAAGGTAATGAACCAGCCTCTCCTCTAGCCATGGGAGCTGGTCATATCAATCCCAACAAAGCCATTCACCCTGGTCTTGTTTACGATGTTGGAGTACAAGATTATGTGAATCTCCTATGTGCATTGAATTTCACTCAAAAGGAAATCACCACTATCACTAGATCCTCTTACAACAATTGTTCTAACCCTTCATTGGATCTTAACTACCCTTCTTTTATTGCTTTCTTTGTTGCCAAGGAATCTCATAGTCACTCAGAGACAAAAATACAAGAATTTGAGAGAACTGTGACAAATGTTGGGGAGGGACCAACAACCTATGTTGCTAGTGTTACACACATTGAAGGGTACCATGTTAGTGTCATCCCAAACAAGTTGGTGTTTTGGGAGAAGAATCAGAAGCTAAGGTACAAGTTGAGGATTGAAGGTCCAAGGATGAAGAATAAGAATAAGGATAAGAAAGTTGCTTTTGGATATCTCACTTGGAAGGACGTGAAGCATGTGGTTAGGAGCCCTATTGTGGTACTCACCACCCTCAATCTCTAG 2202 0.4024 MDLSAMPKPFSNQHNWYLATLSSALNNSEFTTNNLNSYSSKHIYTYTNVMNGFSASLTPLELEALKSSPGYISYIRDLPVKPDTTHSPQFLGLNPFSGAWPASKYGKDVIIGVLDTGVWPESESFKDYGLTNIPSRWKGQCENSIQFNSSLCNNKLIGAKFFNKGLLAKNPNITIAKYNSTRDTDGHGTHTSSTAAGSQVNDVSYFGYASGTARGIASSARVAMYKILWEIGGYPSDIIAAIDSAIQDGVDVLSLSFGFDETRLYEDPVAIATFAAMERGIFVSTSAGNEGPYLETLHNGTPWVITAAASTLDREFHGTLSLGNSVQITGLSLYIFDFSVDHVPIVFMGLCNNLRQLVKVRNKIVVCEDKNETLPDQVSNVETAQVVGAVFISNSSDLYEFYLQNSFPSIIISPIDGEIVKFYIKSNKLYAKASMSFKITAVGKKPAPSVDSYSSRGPSYSCPYVLKPDITAPGTSILAAWPKNVPATILGSKNIFSNFNLLSGTSMSCPHVTGVAALLKGAYPHWSPAAIRSAIMTTSDILDNTLEHIKDIGQGNEPASPLAMGAGHINPNKAIHPGLVYDVGVQDYVNLLCALNFTQKEITTITRSSYNNCSNPSLDLNYPSFIAFFVAKESHSHSETKIQEFERTVTNVGEGPTTYVASVTHIEGYHVSVIPNKLVFWEKNQKLRYKLRIEGPRMKNKNKDKKVAFGYLTWKDVKHVVRSPIVVLTTLNL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0548 733 Pfam Fibronectin type-III domain 619 727 IPR041469 -
Lal22g0548 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 504 514 IPR023828 -
Lal22g0548 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Lal22g0548 733 ProSiteProfiles Serine proteases, subtilase domain profile. 90 575 - -
Lal22g0548 733 Gene3D - 592 730 - -
Lal22g0548 733 Gene3D - 313 443 - -
Lal22g0548 733 Gene3D Peptidase S8/S53 domain 108 588 IPR036852 GO:0004252|GO:0006508
Lal22g0548 733 Pfam Subtilase family 106 565 IPR000209 GO:0006508|GO:0008236
Lal22g0548 733 PANTHER PUTATIVE-RELATED 1 729 - -
Lal22g0548 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 729 IPR045051 -
Lal22g0548 733 CDD Peptidases_S8_3 80 540 IPR034197 -
Lal22g0548 733 SUPERFAMILY Subtilisin-like 83 579 IPR036852 GO:0004252|GO:0006508
Lal22g0548 733 Pfam Peptidase inhibitor I9 6 81 IPR010259 -
Lal22g0548 733 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Lal22g0548 733 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Lal22g0548 733 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Lal22g0548 733 CDD PA_subtilisin_like 319 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0548 Lal-Chr22 3700991 3703192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0548 1 716 Subtilisin-like Serine Gene Family AT5G67090 46.175 0.0 616