Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0545 ATGGAAGCACAAAGCTCTCACGATGCCCAAGTTATTGATGTCAGTGGAGATATTCTTCCTGGACGAAGTAAGATTTGTGCAGAAGTCCCATGTGGGTTTGCAGATGCTGGATCCATCTCCAAGGATTCTGAAGAACGATCAACTTCCATGCGAAAGCTTTTGATGGCAGTGGTCCTCTGTGTTATTTTCATGGCTGTTGAGGTAGTTGGTGGCATCAAAGCCAACAGTCTCGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTCGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACTCCCCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAAATGATATGGTTGCTTGCTGGAATTCTGGTATATGAAGCCATTGCTAGAATCGTTGCTGGTTCTGGCGAGGTGGATGGGTTTTTAATGTTTCTAGTTTCTACATTTGGTCTAGTGGTTAACATTGTTATGGCTTGTTTATTGGGGCATGATCACGGCCATGGCCATGGTCATGGACATGATCACGGCCATGGACATGATCACGGCCATGGAGAAGATGATCATCACGATCATGGGCATCATGGGCATCATGGGCACAGCCATGGAGTTTCAGTGTCTCATCATCATGATGTAAAGCACACAATAACTGAGCACCATCATACTCATGATGTTGAAAAGCCTTCAGGAGCACACAGTCATGCTCACAAGGATGTCACTGAACCACTTATTGGTGAATCAAAAGACGGGCCTAAGAAGAAAAAGCAATGGAACGTAAATGTGCAGGGGGCTTATCTACACGTACTCGGGGACTCTATTCAGAGTGTTGGGGTAATGATTGGGGGAGCAGTCATATGGTATAAGCCTGAATGGCAAATAGTTGATTTGATTTGCACTCTAATCTTTTCAGTAATTGTTTTGGGGACAACTATCAATATGCTGAGAAACATATTGGAAGTCCTGATGGAGAGCACGCCGCGTGAGATTGATGCTACTAAGCTGGAAAGAGGGCTGTTGGAGATGGAAGAAGTGGTGGCTGTTCATGAGCTGCATATATGGGCCATTACAGTTGGGAAAATTTTGTTAGCTTGTCATGTTAAAATCAGACCTGAAGCAAATGCAGACCTGGTGCTGGACAAGGTTATAGAGTACATCGAAAGGGTGTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1242 0.4436 MEAQSSHDAQVIDVSGDILPGRSKICAEVPCGFADAGSISKDSEERSTSMRKLLMAVVLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIARIVAGSGEVDGFLMFLVSTFGLVVNIVMACLLGHDHGHGHGHGHDHGHGHDHGHGEDDHHDHGHHGHHGHSHGVSVSHHHDVKHTITEHHHTHDVEKPSGAHSHAHKDVTEPLIGESKDGPKKKKQWNVNVQGAYLHVLGDSIQSVGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLERGLLEMEEVVAVHELHIWAITVGKILLACHVKIRPEANADLVLDKVIEYIERVYNISHVTIQIER 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0545 413 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 341 412 IPR036837 -
Lal22g0545 413 MobiDBLite consensus disorder prediction 181 207 - -
Lal22g0545 413 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 336 IPR027469 -
Lal22g0545 413 PANTHER METAL TOLERANCE PROTEIN A1 192 413 - -
Lal22g0545 413 PANTHER METAL TOLERANCE PROTEIN A1 1 187 - -
Lal22g0545 413 Pfam Cation efflux family 53 335 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal22g0545 413 TIGRFAM CDF: cation diffusion facilitator family transporter 50 413 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal22g0545 413 Gene3D Cation efflux protein transmembrane domain 49 334 IPR027469 -
Lal22g0545 413 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 192 413 - -
Lal22g0545 413 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 187 - -
Lal22g0545 413 MobiDBLite consensus disorder prediction 181 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0545 Lal-Chr22 3673849 3677612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0545 22 413 Inorganic Solute Cotransporters AT3G61940 58.270 4.69e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0545 K14689 - gmx:100794876 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0545 22 3673849 3677612 Lal22g0545 22 3673849 3677612 ECH