Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0536 ATGGTGGTGGATCGAAGGCTGGTACTGGTTTTGATCAGCATCTGTATTATTGGTTTGATCCCTATTCCCACCAATGGTGACACAGATCAAAATGATGTTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCATCCCAGTTAAATTGGCCTCAAGATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATAACTTGCTCAGGCAACCGAGTCACGGAGATTAAGCTACCCGGTCTTGAACTAAGTGGAACTTTGGGTTACCAATTACAATCCTTGACATCTGTGACCACCCTAGACTTGAGTAACAACAATCTTGATGGAGCCATACCATATCAACTTCCTCCAAATGTGGCGCGCTTAAATCTTGCTAATAATAATTTCAGTGGGATGGTCCCATATTCTCTTTCAGATATGACTTCTCTTAGGGACCTGAATCTTGGTCATAATCAGCTCCAGCAAGCACTGAATGTCAACTTCCAAAAGCTTACTTCCCTCTCTACATTGGATCTCTCTTTCAATTCTTTGACAGGAGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCACATCCACCATGTATCTACAAAACAACCAGTTTACAGGCACCATTAACGTCCTAGCGAATCTGCCTCTTGAGACTCTGAATGTGGAAAACAACAAGTTTTCAGGCTGGATACCAGAACAGTTGAAAAGCATAAATATAAAAACGGATGGTAATACGTGGAGCTCAGGACCTGCACCTCCACCTCCTCCTGGCACACCTCCAGTAACAAAGACCAACCCGGATCACAAATCTGGTGGGCATAGCACCCCTTCAGGTTCTGGCACAAGTGATGGGGGTAAAAAATCTGGTATTGGAGGTGGTGCCATTGCTGGAATTGTGATCAGCATCTTGGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCGTCTTCAGACGTGGAAAAGCTTAACAATCAGCCCTTGGCTCCTCTTACCTCAAATGGAATACATGAATCAAATTCTATGCAATCTTCATCTGTAATTGATTTGAAGACATTTGATCCTCCTGTGGCCCCAATAAATCTTAAACCCCCACCTTTGGATCGTCATAAATCAGCTGATGAGGAAGAGTTTTCAAATAAGCCCATTATTCTCAAGAAGAACGTACCAGCTCCTGCAAATGTGAAAGCATATTCCGTAGCCGACCTGCAGATTGCTACTGGAAGCTTCAGTGTGGATCAACTTCTTGGCGAAGGTTCCTTTGGACGTGTATACCGTGCCCATTTTGATGATGGAAAGGTTCTTGCAGTAAAGAAGATAGATTCATCTGTCCTTCCCAATGATTTGTCTGAAGATTTTTCAGAAATCGTTTCTAGTATCTCTCATTTGCATCATCCAAATGTCACAGAGCTTGAAGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTACGAGTTTCACAAAAACGGGTCACTGCATGACTTCCTTCACCTACCTGATGAGTATAGTAAACCGTTGATATGGAATACCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTACACGAAGTTTGTTCACCATCAGTTGTTCACAAGAACATTAAGTCAGCCAATATATTGCTTGATACAGAACTTAATCCTCATATTTCAGACTGTGGATTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAACCAATAATGCTGGATCTGGATATGATGCTCCCGAAGTAGGCTTGTCTGGTCTTTACAGTCTTAAGAGTGATGTATACAGCTTTGGAGTTGTCATGCTGGAACTTCTTAGCGGTCGGAAACCATTTGATAGCTCAAGGCCGAGATTTGAACAGTCTTTGGTTCGATGGGCAACACCTCAACTTCATGATATTGATGCATTGGCTAAAATGGTCGATCCTGCACTGGAGGGGCTATACCCTATTAAGTCTCTTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCAGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACATGAGCAAGCGGACATATGGAGCTGATCAAGGAGGATCCAACCAAGGGGGTGATGATCCAGAAGACATTTAA 2148 0.4334 MVVDRRLVLVLISICIIGLIPIPTNGDTDQNDVASLKVMFQSMNSPSQLNWPQDGNDPCGQSWKGITCSGNRVTEIKLPGLELSGTLGYQLQSLTSVTTLDLSNNNLDGAIPYQLPPNVARLNLANNNFSGMVPYSLSDMTSLRDLNLGHNQLQQALNVNFQKLTSLSTLDLSFNSLTGDLPQTLSSLSSTSTMYLQNNQFTGTINVLANLPLETLNVENNKFSGWIPEQLKSINIKTDGNTWSSGPAPPPPPGTPPVTKTNPDHKSGGHSTPSGSGTSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKSSSDVEKLNNQPLAPLTSNGIHESNSMQSSSVIDLKTFDPPVAPINLKPPPLDRHKSADEEEFSNKPIILKKNVPAPANVKAYSVADLQIATGSFSVDQLLGEGSFGRVYRAHFDDGKVLAVKKIDSSVLPNDLSEDFSEIVSSISHLHHPNVTELEGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNTRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHISDCGLASYIPNADQVLTNNAGSGYDAPEVGLSGLYSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPIKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTYGADQGGSNQGGDDPEDI 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0536 715 PRINTS Leucine-rich repeat signature 97 110 - -
Lal22g0536 715 PRINTS Leucine-rich repeat signature 164 177 - -
Lal22g0536 715 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0536 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lal22g0536 715 MobiDBLite consensus disorder prediction 322 342 - -
Lal22g0536 715 MobiDBLite consensus disorder prediction 260 281 - -
Lal22g0536 715 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Lal22g0536 715 Gene3D Ribonuclease Inhibitor 27 180 IPR032675 -
Lal22g0536 715 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Lal22g0536 715 SMART LRR_typ_2 164 188 IPR003591 -
Lal22g0536 715 SMART LRR_typ_2 94 122 IPR003591 -
Lal22g0536 715 SMART LRR_typ_2 140 163 IPR003591 -
Lal22g0536 715 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lal22g0536 715 MobiDBLite consensus disorder prediction 319 342 - -
Lal22g0536 715 SUPERFAMILY L domain-like 30 231 - -
Lal22g0536 715 PANTHER OS01G0253100 PROTEIN 18 712 IPR045271 GO:0004714|GO:0006468
Lal22g0536 715 Gene3D Ribonuclease Inhibitor 181 245 IPR032675 -
Lal22g0536 715 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Lal22g0536 715 MobiDBLite consensus disorder prediction 245 259 - -
Lal22g0536 715 MobiDBLite consensus disorder prediction 696 715 - -
Lal22g0536 715 CDD STKc_IRAK 418 687 - -
Lal22g0536 715 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Lal22g0536 715 SUPERFAMILY Protein kinase-like (PK-like) 395 684 IPR011009 -
Lal22g0536 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 712 - -
Lal22g0536 715 MobiDBLite consensus disorder prediction 237 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0536 Lal-Chr22 3579051 3585804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0536 8 701 Strubbelig Receptor Gene Family AT1G53730 67.141 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal22g0536 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0536 - - gmx:100780323 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0592 6 3789951 3797188 Lal22g0536 22 3579051 3585804 LSH
Lal22g0536 22 3579051 3585804 Lal18g0308 18 2543176 2550329 LSH