Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0525 ATGGAGATTTCTGCTTTCTACGAAACCAAAACTGCGCACTTCGGTGTTGTGAGCACTGATTGGCTTTCCCAAGCTCAATCTGCTATTTCCATTCCCACTCTCTCTTTCCCAATCCCAATTCAACCCTTCTCCGTCATCGATGAATTCAACACGTGGCGCAATCAACCTCATCTCGCTGAAGCCGTCGCCGCCATTCGCGCCTTGGCCGCCGTCATTAGATCCAGTCAAGCCACCACCATGATGCAACTCGAAATCGAGCTCAAAAAAGCTTCCGATTCTCTCAAATCTTGGGATACAACCTCTATATCTTTGACTGCGGGTTGTGATCTGTTTATGCGATATGTAACTAGAACTTCTGCTTTAGAATATGAAGATTTTAATTCAGCTAAGTCTCGTTTGATTGAACGTGCTGAGAAGTTTGGGGAAATTTCATATAAGGCTCGCAAAGTCATTGCAATGCTTAGCCAAGATTTTATATTTGATGGTTGTACAATATTGGTTCATGGTTTCTCCAGAGTTGTACTGGAAGTTTTGAAGCTGGCAGCACAAAATAAGAAACTATTTCGGGTCTTCTGCACAGAGGGGAGACCAGACCGAACAGGTTTACGGCTGTCCAATGAACTGGCCAAGCTCGACGTTCCTGTGAAAATTGTGATAGACTCTGCCGTGGCATATTCTATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTTGTTGAAAGTGGTGGTATAATTAACATGATGGGGACATACCAAACTGCATTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTATCCTTTGGACCAGAAGGATTTAGCCCCTGCCTTACGCCCAGTTGATTTCGGTGTACCTATTCCGTCCAAGGTTGAGGTTGAATGTTCTGCCAGGGATTATACTCCTCCTCAATATCTTACCCTACTTTTCACAGATTTAGGTGTTCTTACACCATCAGTGGTTAGTGATGAGCTCATCCAACTATATCTATAA 1029 0.4402 MEISAFYETKTAHFGVVSTDWLSQAQSAISIPTLSFPIPIQPFSVIDEFNTWRNQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVLEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKIVIDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQTALVAKSMNKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0525 342 Pfam Initiation factor 2 subunit family 56 330 IPR000649 GO:0044237
Lal22g0525 342 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 4 342 - -
Lal22g0525 342 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 4 342 - -
Lal22g0525 342 Gene3D - 145 342 IPR042529 -
Lal22g0525 342 Gene3D - 42 143 IPR042528 -
Lal22g0525 342 SUPERFAMILY NagB/RpiA/CoA transferase-like 57 341 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0525 Lal-Chr22 3489229 3491433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0525 3 342 Eukaryotic Initiation Factors Gene Family AT1G53880 82.698 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0525 K03239 - gmx:100808764 590.882