Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0503 ATGCGAAAAGTGCTTCCAAAAGATGCAAGAATCTCTGATGATGCTGTGGATACAATTCAAAAGTGTGCGTCTGAGTTTATTAGCTTCATCACTGAAGCAGCCATTGAGCATTCCAAACTTGACAAAAGGAAGACTATTTCAGCTGAGGACTTGCTTTTCGTGATGGAGAATATGGGTTTTGATGACTATGTTCCTCCACTTACTCTTTTTCTCGAACGTTATCGTAACCATTCAGTGCAAGTTGGTGTTCCAAATGTTGAGACTCCGCTGCCACCGCCGCCACCGCCATTGCCACAATCAGAAATCTCTAATAAAACAAGCTTGGATATGTTCTATGAAGATGGGGCTGGTGATGTTTAG 360 0.425 MRKVLPKDARISDDAVDTIQKCASEFISFITEAAIEHSKLDKRKTISAEDLLFVMENMGFDDYVPPLTLFLERYRNHSVQVGVPNVETPLPPPPPPLPQSEISNKTSLDMFYEDGAGDV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0503 119 MobiDBLite consensus disorder prediction 84 105 - -
Lal22g0503 119 Gene3D Histone, subunit A 1 83 IPR009072 GO:0046982
Lal22g0503 119 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 86 - -
Lal22g0503 119 SUPERFAMILY Histone-fold 1 76 IPR009072 GO:0046982
Lal22g0503 119 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
Lal22g0503 119 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Lal22g0503 119 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Lal22g0503 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Lal22g0503 119 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 86 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lal22g0503 119 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0503 Lal-Chr22 3336284 3336643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0503 1 83 CCAAT-HAP3 Transcription Factor Family AT5G47670 55.422 2.28e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal22g0503 CBFD_NFYB_HMF 9.8e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0503 K08065 - cpap:110820722 102.449