Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0500 ATGGTGCAATCAACCATAGAAAACGGTGGCTCCGGTGGCCGCACGGTGGTGGTGGGTGTGAGGATTGACTCACCCAGTAGAGAGTTGCTCACTTGGGCATTGTTTAAAATTGCTCAGCCTGGTGATGTTGTTCTCGCTCTTCATGTTCTTGCTAACAATGAAATTGTGAATAAAGATGGAAAATCATCTCTTTTTTCACTTGTCAAGGCCTTTGAATCTGTTCTTGCTGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGAATTGAAGATGAAAATTTGCCGGGGTTCATCAGTGAGGAAAATTTTGGTTAGAGAAGCCTTTGCATGTTCTGCAACTCATGTTATAGTTGGAACTCCTCATGGACTTCATAAAATTCGGCCTGGTACCACTGTAGCAAAGTACTGTGCTAAAAAGTTATCCAATGAATGCTGTGTTCTTGCCATTAATAATGGCAAAGTTGTGTTCAAAAGAGATGGATCACCAGAAACTCATGCTCACTTAAAAGGAATTGAATGCGATCACAAAAATGGCTTGCTTGGTTCGATTCACCGGAGACTCAACAAGAGTTCAAAAGTACTAAATGATGAAGGTAGTGGCCAAATTTTTTCAGATCACAGTTTAGCTAAGATTTTTCTGGATTCTACAGAAAACAAAAGCTGCTCAATTTGTGGTCCAACTTCAGCATCAAACTCATCTTGCCTGGATAATGCTGAAGAGTCTTCTACCAATGGTGATAATCAGAATTCTTTAGCTATAGTGCCTGTACAGACCAATGATTCAGTGACTACTAGAACTTTACATTGCAGAGAACTACCTGAATTGAAACCAGGTTGGCCACTACTACACGGGGCAATTTTATCTGGTAGGCATTCTACTGAAAGATCATTGTTAAGCCAGATCTCGGTGGTCGAGTGGGCAATGCGGCTGCCTTGTAGAAATCTTTCATACTCTACCAACCAAGATCTCAAAACAAACAATTGTGACAGATCTCAAGATCAATCTTTGGCTCTAGACAGCAAAACTGGTGCTCTTGTTCCTGTAGATACTGAAATTTGGGCAGCTTTTTCGCCTGAACGAAATTTAAGAAGTATTCCTAAAGAATTGGAGGGCCTTCATGACAGGTACGCATCGTCTTGCAGATTGTTTGAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTGCCTGAAAATTTGATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGTTGCCTTCCTGATGGCAAGGAACTTGCCGTTAAGATCTTGAAGCCTTCCGAAGATGTTTTGGAAGAGTTTGTTCTGGAAATAGAAATCATCACTACCTTGCATCACAAAAATATTATTTCCCTCATTGGGTTCTGCTTTGAGGATGACAATCTTCTTTTGGTATACGATTTCTTATCAAGAGGAAGCCTCGAAGAGAACCTTCATGGCAATAAGAAAAACCCACTCGTGTTTGGTTGGAATGAACGATATAAAGTGGCAGTTGGTGTTGCTGAGGCCTTGGAATATCTGCATAATAACGATGTCCAGCCAGTGATCCACCGTGATGTAAAATCATCAAATGTGTTATTATCTGAGGATTTTGAGCCCCAGCTGTCTGATTTTGGACTTGCTAGATGGGCATCAATCTCATCATCACATATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACTTAGCTCCTGAATACTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTACGCATTCGGCGTCGTCCTCCTTGAGCTTCTTTCGGGGAGAAAGCCTATAAGCGGTGATTTTCCCAAAGGTCAAGAAAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGGAAAGTATCACAACTGTTGGATCCTGGTTTAGGCGATAATTATAATCACGAAGAGATGGAAAGGATGGTATTAGCAGCCACACTTTGTATCAGACGCGCTCCAAGAGCTAGGCCACAAATCAGCATTATCTCGAAACTCCTTCAAGGTGATGCCGATGTGATCAAGTGGGCAAGGCTAGAAGTTAGTGCTTTAGTAGCACCTGAAATTCTTGATGATGAAACTTGTCCAGCATCTAACCTACAATCACATCTTAATCTTGCATTTCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGCATTGACCAGAATGTCTCGCTGGAGGACTACTTGCGAGGCCGGTGGAGCCGCTCATCGAGCTTCGACTAA 2226 0.4182 MVQSTIENGGSGGRTVVVGVRIDSPSRELLTWALFKIAQPGDVVLALHVLANNEIVNKDGKSSLFSLVKAFESVLAVYEGFCNLKQVELKMKICRGSSVRKILVREAFACSATHVIVGTPHGLHKIRPGTTVAKYCAKKLSNECCVLAINNGKVVFKRDGSPETHAHLKGIECDHKNGLLGSIHRRLNKSSKVLNDEGSGQIFSDHSLAKIFLDSTENKSCSICGPTSASNSSCLDNAEESSTNGDNQNSLAIVPVQTNDSVTTRTLHCRELPELKPGWPLLHGAILSGRHSTERSLLSQISVVEWAMRLPCRNLSYSTNQDLKTNNCDRSQDQSLALDSKTGALVPVDTEIWAAFSPERNLRSIPKELEGLHDRYASSCRLFEYQELVSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSEDVLEEFVLEIEIITTLHHKNIISLIGFCFEDDNLLLVYDFLSRGSLEENLHGNKKNPLVFGWNERYKVAVGVAEALEYLHNNDVQPVIHRDVKSSNVLLSEDFEPQLSDFGLARWASISSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISGDFPKGQESLVMWASPILNSGKVSQLLDPGLGDNYNHEEMERMVLAATLCIRRAPRARPQISIISKLLQGDADVIKWARLEVSALVAPEILDDETCPASNLQSHLNLAFLDVEDDSLSMCSIDQNVSLEDYLRGRWSRSSSFD 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0500 741 ProSiteProfiles Protein kinase domain profile. 395 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0500 741 SUPERFAMILY Protein kinase-like (PK-like) 377 668 IPR011009 -
Lal22g0500 741 MobiDBLite consensus disorder prediction 226 249 - -
Lal22g0500 741 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 735 - -
Lal22g0500 741 PANTHER OS01G0253100 PROTEIN 7 735 IPR045271 GO:0004714|GO:0006468
Lal22g0500 741 Gene3D Phosphorylase Kinase; domain 1 364 469 - -
Lal22g0500 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Lal22g0500 741 Gene3D Transferase(Phosphotransferase) domain 1 470 676 - -
Lal22g0500 741 SMART serkin_6 395 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0500 741 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Lal22g0500 741 Pfam Protein kinase domain 399 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0500 Lal-Chr22 3317456 3321541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0500 377 666 Trihelix Transcription Factor Family AT1G68690 46.644 3.51e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal22g0500 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0500 - - aprc:113846853 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0500 22 3317456 3321541 Lal22g0500 22 3317456 3321541 ECH