Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0499 ATGTTGAAGACGAAAGCATTCATCGGCGCCAATGTCTTCATGTCACGGAACTTGGTTCCTCCTGAAATTTTCCCCACGCTCCACGACGCGCTCAATGACAACGGCGCTCAAATCCATCTCTGTTGTGATCCTTCTCGCAATGGCACCAACGATTATCACATCATTTCCTCCACTAAACACGATAAGTTTGAGGATCTTAAATCCAAGGGCTGCAAATTGCTTGGTCCTAGATGCGTTCTGTCGTGTGCTAAAGAATGTAGGCCTCTACCTAAACAAGGCTTCACTTGTTGCCTTGCCATGGATGGTGTCAAACTACTTGCATCTGGCTTTGACATGGATGAGAAGGTTAAGATAGAAGAGTTAGTGACTGAAATGGGTGGAATTCTACATGCTAAGGCATCACTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTAGCTGCAAAATATAAGTGGGCTTTGAATACCCTGAAGAAACCCATAGTCACTTATGAGTGGTTAAAGCAATGCTCAGATGAGCATCGCGTTGTTCCTCAAGAGTCATACAAGGTCCTTCCTTTCTCTGGGTTAACAATTTGTGTTACTGGAATTCCAGCAGCTCCTGAAGGTGACAAATATAAAGTGGCAAAACGTTGGGGCCACATTCATATTGTGACAAGTAAATGGTTTGATCAATCTATTGCTCGAAGAGCATGTCTGAATGAGGAGTCCTACCCTGTACAGAATGGATCTTTATCTTCACATAAAGCAACTAGGGATTCAACGGTGCTACATAGCCAAGAAAAGGAAATTAGTAAATTGCAGTCTGTGGCATCAGCAGCAGCTGCAGATTCAAATGTGACAGTTTTTTCTCGTGCCGACTTTGTGGATAGAGATCTAGACGTCACACAGTCAGAATGCATGTCTCCGTTTTCAAATGTTCCTGCATTTGTTAAAGAGGCAGATGCTGAAGCACCACCAGTGAAGTCCAACAATGAATTGGACTTTGATGGTGTTGTTGCCAATGATTCTGAATCTGATGATAATGATCTGTACTTATCAGAGTGCAGAATATTACTTGTTGGCTTTGAAACATCTGAAATGCGGAAACTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATCTATGTCTTTTAATGACAAGTTGACACATATAGTAATTGGCTGTCCTTCAGAAATGGAAAAGAAGGATATAAGGCATCTCGCTTCTTTAGGTGTCATTTATGTTGTTACGACATCTTGGCTTGAAGACTGTCACCGTCAAAAGAAAGAAGTCCCTGTTCTTAGGAGACACATTGCATGTGATCTATTTCTTCCTAAAGCAACCTCAGTAAAAGGAGGAGCACTGAAAAGCATGTTGTCCACTGAGCAAGGTAAAAGCTCTGGCTTTCATCAGAGCTTGCAGACTGACCACATGGTGAGCATTATGGATTCCAGAGTTGTAATGCCAGTATCTTTGGATAAAAGCAAAGAGAAGCCAGATATGGGTATACATGTTCAGACAGTCAGTAAAGCATTGGGCAGACCTGTGTCAAAAAAGGAACTTCCTGTCGATAATTTTAAGGTTCCAAAGAGGATGAAACACGACTCTGGTGTTAAAAAAGTGAAGTCAACAACTGTTTTCAGAGGGAAAATATTTTGCTTCTCAAATTTATTTCCTGAAGAAAGGAAAGCTGAGATTGTCCAATGGATAAGTCAAGGTAGTGGAGAAGTAATAAGCGAGCAGGCAAATCAGAATGTTCACTATACTATTGAGTGTCATGGTGTAACACCAAAGTTGATTGGCAACTCACAGAGTACATATATTTCCAGTCACTGGATACGATCTTGCTTGGAGGCTGGTTCCTTGCTGGATCTTGAGGGTCACATTCTTTATTCCCCACTTCCTTGCTGTGTTCCATTACCTGGGTTTGAAAGCTTCCGATTTTGTGTTTCACAATATGATGAGAAAGACAGAGTCCTACTTAGAAACTTGTGTTTCGTTCTGGGAGCTAAATTTGTGGAGAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTAGATTCACCAATGGTCCTAAGTATGAGGCTGCTTGTAAGTGGGGGATCCGATCAGTTACATCCGAATGGATATTGGAATGTGTCAAAAAGAACGAAGTTGTTTCGGTTGATCAATTTTTACCAAAAGAAGTCACTGATCAAGACCAAGAGGCAGGAGCTTGCACTACGAGTCAATTTCCTACTCAGGCTGCTCGAATGATAAGTGACATGCCATCCCAGTTTCCAAGTCAATCACAAGATTCGAGAAACATCCCAAATATATACTTAAGTAGTGAAGTAGACAATCATCGCACTGATTCTAAAATATCAAGTATTTACAGCAAAAAAGCAAGGCTTGTGGAAGAGCATGACCTATATGATAAAGTGCCTTTTGCGGTGGATTCAAGTATTCATGTCAATAATATGAATTTCTCTGAAGACAATGTACATAAATATGTCGGAGAGGTCTCACATGCTGTTCCTGATGTCGCTGATGCAATTGAGGACTTGTTAGAGCAGACAAGTAAGATCCATGATCAGGGTTCTCCAGTGCAGGCAGGGTGTGAGAGAACCCTTGGTGAGGACAATTCAAATCTTCATACTGTCGTTGGGTTATCTAAAAACTGGTTAAACAGTTCAGTTTTTCAGAAGCTCAACTGTTCTGAGTGCAAAACTTTTTCGGAAAAGATATCTACTGAACTTGCATGTTTTAAAAGTGCCAGACAGGATGATAATGGTGAGGCTTCTCGAGATCGAAGAACCGGAATGTACGATGGTTTTAGTGAAACACAAACAGAATCTCAGGTTGTCAGTTACGAAGAAGATTTGTCGGGAAGGCAAATGCTTATAGACAGAGTCCGAACTCGA 2886 0.4127 MLKTKAFIGANVFMSRNLVPPEIFPTLHDALNDNGAQIHLCCDPSRNGTNDYHIISSTKHDKFEDLKSKGCKLLGPRCVLSCAKECRPLPKQGFTCCLAMDGVKLLASGFDMDEKVKIEELVTEMGGILHAKASLDLNFVIVKNVLAAKYKWALNTLKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLTICVTGIPAAPEGDKYKVAKRWGHIHIVTSKWFDQSIARRACLNEESYPVQNGSLSSHKATRDSTVLHSQEKEISKLQSVASAAAADSNVTVFSRADFVDRDLDVTQSECMSPFSNVPAFVKEADAEAPPVKSNNELDFDGVVANDSESDDNDLYLSECRILLVGFETSEMRKLVNMVRKGGGSRSMSFNDKLTHIVIGCPSEMEKKDIRHLASLGVIYVVTTSWLEDCHRQKKEVPVLRRHIACDLFLPKATSVKGGALKSMLSTEQGKSSGFHQSLQTDHMVSIMDSRVVMPVSLDKSKEKPDMGIHVQTVSKALGRPVSKKELPVDNFKVPKRMKHDSGVKKVKSTTVFRGKIFCFSNLFPEERKAEIVQWISQGSGEVISEQANQNVHYTIECHGVTPKLIGNSQSTYISSHWIRSCLEAGSLLDLEGHILYSPLPCCVPLPGFESFRFCVSQYDEKDRVLLRNLCFVLGAKFVEKLTKKVTHLLCRFTNGPKYEAACKWGIRSVTSEWILECVKKNEVVSVDQFLPKEVTDQDQEAGACTTSQFPTQAARMISDMPSQFPSQSQDSRNIPNIYLSSEVDNHRTDSKISSIYSKKARLVEEHDLYDKVPFAVDSSIHVNNMNFSEDNVHKYVGEVSHAVPDVADAIEDLLEQTSKIHDQGSPVQAGCERTLGEDNSNLHTVVGLSKNWLNSSVFQKLNCSECKTFSEKISTELACFKSARQDDNGEASRDRRTGMYDGFSETQTESQVVSYEEDLSGRQMLIDRVRTR 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0499 962 MobiDBLite consensus disorder prediction 931 946 - -
Lal22g0499 962 Gene3D BRCT domain 632 727 IPR036420 -
Lal22g0499 962 MobiDBLite consensus disorder prediction 914 946 - -
Lal22g0499 962 ProSiteProfiles BRCT domain profile. 638 721 IPR001357 -
Lal22g0499 962 Pfam twin BRCT domain 642 703 IPR001357 -
Lal22g0499 962 ProSiteProfiles BRCT domain profile. 100 184 IPR001357 -
Lal22g0499 962 Gene3D BRCT domain 39 94 IPR036420 -
Lal22g0499 962 ProSiteProfiles BRCT domain profile. 341 433 IPR001357 -
Lal22g0499 962 SUPERFAMILY BRCT domain 342 427 IPR036420 -
Lal22g0499 962 MobiDBLite consensus disorder prediction 916 930 - -
Lal22g0499 962 SMART BRCT_7 97 174 IPR001357 -
Lal22g0499 962 SMART BRCT_7 635 711 IPR001357 -
Lal22g0499 962 SMART BRCT_7 539 615 IPR001357 -
Lal22g0499 962 SMART BRCT_7 343 423 IPR001357 -
Lal22g0499 962 CDD BRCT_TopBP1_rpt2_like 636 711 - -
Lal22g0499 962 SUPERFAMILY BRCT domain 186 241 IPR036420 -
Lal22g0499 962 SUPERFAMILY BRCT domain 58 183 IPR036420 -
Lal22g0499 962 SUPERFAMILY BRCT domain 540 627 IPR036420 -
Lal22g0499 962 Gene3D BRCT domain 534 631 IPR036420 -
Lal22g0499 962 Pfam BRCT domain, a BRCA1 C-terminus domain 539 621 IPR001357 -
Lal22g0499 962 Pfam BRCA1 C Terminus (BRCT) domain 102 170 IPR001357 -
Lal22g0499 962 SUPERFAMILY BRCT domain 634 722 IPR036420 -
Lal22g0499 962 Gene3D BRCT domain 332 430 IPR036420 -
Lal22g0499 962 Gene3D BRCT domain 98 189 IPR036420 -
Lal22g0499 962 ProSiteProfiles BRCT domain profile. 537 625 IPR001357 -
Lal22g0499 962 ProSiteProfiles BRCT domain profile. 191 240 IPR001357 -
Lal22g0499 962 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 8 953 - -
Lal22g0499 962 Gene3D BRCT domain 190 243 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0499 1 962 Core DNA Replication Machinery Family AT1G77320 46.445 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0499 K10728 - gmx:100804966 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0499 22 3293670 3303851 Lal22g0499 22 3293670 3303851 ECH