Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0492 ATGGAGATGGAGGTTGTGGATACACCAAAGCTACAACAAGAACATTTTCATGTGTTAGTGGTTGATGATAGTGTTATTGATAGGAAGCTTCTGGAGAGGCTCCTAAGAGATTCTTCATGCAAAGTTACCTTCATGGAATCTGGAGACAAGGCTCTGAAATATCTCGGCCTTCATAATTCTTCCTCAACTTCTTCAAACCATGGAATCAAAGTCAATTTGATCATGACAGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTCAAAAGAATCAAGGAATCTACTTGGAGAGATGTACCAGTAGTGATTATGTCATCAGAAAAGATACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGAGCAGAAGAATTTCTATCAAAGCCTCTTCAGTTATCAGATTTGAAGAGGCTTCAGCATTCCTTTATGAAATCCTTTGATAATTCTAGCAAACAAGACTATGCTAATAGTTCCATTGCTTCTAACAATGACAACATTATAGAAAAAAATGTTATTAGCAAAATGAAGGGGATACAGGTTGAGCATGGTTTTAAATTATGGTATGTCACTGCAATTGCGACCGCAATATTGCAGATTTGGAAGTCTTTATAA 612 0.3775 MEMEVVDTPKLQQEHFHVLVVDDSVIDRKLLERLLRDSSCKVTFMESGDKALKYLGLHNSSSTSSNHGIKVNLIMTDYCMPGMSGYDLLKRIKESTWRDVPVVIMSSEKIPSRISMCLEGGAEEFLSKPLQLSDLKRLQHSFMKSFDNSSKQDYANSSIASNNDNIIEKNVISKMKGIQVEHGFKLWYVTAIATAILQIWKSL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0492 203 CDD REC_typeA_ARR 18 138 - -
Lal22g0492 203 Gene3D - 17 174 - -
Lal22g0492 203 SMART REC_2 16 139 IPR001789 GO:0000160
Lal22g0492 203 Pfam Response regulator receiver domain 18 136 IPR001789 GO:0000160
Lal22g0492 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 9 173 - -
Lal22g0492 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 173 IPR045279 GO:0009736
Lal22g0492 203 ProSiteProfiles Response regulatory domain profile. 17 143 IPR001789 GO:0000160
Lal22g0492 203 SUPERFAMILY CheY-like 16 144 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0492 Lal-Chr22 3249310 3251787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0492 13 145 Response Regulator Gene Family AT3G57040 57.639 1.55e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal22g0492 Response_reg 6.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0492 K14492 - gmx:100790440 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0492 22 3249310 3251787 Lal22g0492 22 3249310 3251787 ECH
Lal18g1121 18 14171913 14181001 Lal22g0492 22 3249310 3251787 LSH