Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0479 ATGGGGAATGAGGACCAAAATGGTGGTGATAGGTTGAGCATGTTCCATAAGGTGAAGCCTTACCTTGCTATGGTGTCCCTTCAATTTGGTTACGCTGGCATGTATATCATCACCATGATTTCTTTCAAACATGGCATGAGCCATTGGATACTCTCAGTGTATCGTCATGTAGTTGCTACTCTTATCATGGCCCCTTTTGCTCTTGTGCTAGAAAGTAAGGCCAAAGATGACTCTCCCAATCTTCCTGAGACTAGCGGTGCTTGGTTTCCTCGAATATGTGGGTTGATAATTTTGTTGCTGACGAAAACAAATAGGCCAGTGCTTGATCAGAATTTGTACAACATGGGGATGAAGTACACCTCAACAACGTTTGCATCCGCTACCGTTAATGTCCTCCCAGCCATTACTTTCATAATGGCACTCATTTTCAGGTTAGAGAGAGTGAACTTGAAAAAAATACACAGCTTAGCCAAGGTAATTGGAACTGCTGTAACGGTCTCAGGAGCTATGGTTATGACATTGTACAAAGGTCCAGAACTTCAGATTATAAAGGGACAAAATGGTAGCCAAAATAACAATGCCAGCACCGAGGCCTCTAATTGGGTGCTTGGAACACTAATGCTTATTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATATTGCAATCTTTCACTTTGAAGTTGTACCCGGCAGAGCTCTCTATGACATCTTGGATTTGTTTTTTGGGTATTTTTGAGGGTGCAATTGCATCCCTTATATTTGAACGTGACATGAGTGTATGGTCCATTGGGTGGGACTCAAGGCTTCTAGCTTGTGTTTATTCCGGAGTGGTTTGTTCTGGAATGGCATACTATATACAAGGAGTGGTAACAAGGGAACGTGGACCAGTATTTGTGACTTCTTTCAGCCCGCTATGTATGATTATCACTGCTGCATTGGGTTCCATTGTCTTGGCTGAGCAAGTTCATCTGGGAAGTATAATTGGAGCTATTATAATTGTGACCGGGCTTTACACTGTGGTATGGGGAAAAAGCAAAGACAATCTGAACACAAATGAAGGGAAAGGTGAAGGGCAAGAATTACCAATTAAGGATGGTAGAAGATCAGGATCAAACAATTTTGAAAGCATAGAGGTCAATGTTCCTGCTCAAATGAAGGGGGTAGGGATGAATGTCCTACCTGCTGCAAGAACTTAG 1197 0.4261 MGNEDQNGGDRLSMFHKVKPYLAMVSLQFGYAGMYIITMISFKHGMSHWILSVYRHVVATLIMAPFALVLESKAKDDSPNLPETSGAWFPRICGLIILLLTKTNRPVLDQNLYNMGMKYTSTTFASATVNVLPAITFIMALIFRLERVNLKKIHSLAKVIGTAVTVSGAMVMTLYKGPELQIIKGQNGSQNNNASTEASNWVLGTLMLIASCGGWASFFILQSFTLKLYPAELSMTSWICFLGIFEGAIASLIFERDMSVWSIGWDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVHLGSIIGAIIIVTGLYTVVWGKSKDNLNTNEGKGEGQELPIKDGRRSGSNNFESIEVNVPAQMKGVGMNVLPAART 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0479 398 MobiDBLite consensus disorder prediction 350 364 - -
Lal22g0479 398 PANTHER WAT1-RELATED PROTEIN 14 371 - -
Lal22g0479 398 MobiDBLite consensus disorder prediction 349 370 - -
Lal22g0479 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 176 - -
Lal22g0479 398 PANTHER WAT1-RELATED PROTEIN 14 371 IPR030184 GO:0016021|GO:0022857
Lal22g0479 398 Pfam EamA-like transporter family 24 164 IPR000620 GO:0016020|GO:0016021
Lal22g0479 398 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020|GO:0016021
Lal22g0479 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0479 Lal-Chr22 3175778 3183105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0479 17 380 Nodulin-like Gene Family AT4G08300 60.705 6.07e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0479 - - gmx:100808282 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0479 22 3175778 3183105 Lal22g0479 22 3175778 3183105 ECH
Lal22g0479 22 3175778 3183105 Lal6g0517 6 3308581 3312324 LSH