Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0468 ATGAGAAAACACAGAACCCATAGAAGAGTCACCACCATCAATGATTTAAACCAAAAGCCACAGAAAAGAGAAAAACAAAAACAAACCTCATGGGCAGTGATAAAAGGCTCATTTACTTGCAAAAATGTCAAAGTCATAGAACATCAGAAGCAGAAAAAACTTCAGGAATCAAAAGAAAAGAATAACAAGTGCAAGCAAATTAAATGTCCAGTTTCTCTTTGTAATGAAATTAAGGTCATGGCAACAGGAACTCCTGAAGATGTTCACAACAAAAGGGACTCAAAAATGATGAGTGGTGAATACAAAAACAATGTTGCTTCTTATTCTAGCAGATCCATAAAAGCTCCTCTAAATGAAATCAATGGTCTTGTGTATGCTTCTTCTTTTTCTTCTTCTTCTATTTCTTCTGCAAGTGATTCCTTTAGAGGAATGCCATTGAGGAAACTCTCTGGTTGTTATGAGTATACAATGGTGGTTGACCATGTTACTGGTTTAACTAGAGACCCTTCTACTTTGAGAGGTATCATTTGTTCTTATCCTTATTGTGATGAGTTTTTCATGAATCCTGAAAGTTTTGAGTACCATCATGCTATTAGACATGCAGTTTCTGAGCTTGTTCCAGAAGATACAAGCAAGAACATAGTAGAAATCATATTCCAATCAAGCTGGCTAAAGAAACAATCACCAATGTACAAAATTGACCGCATACTTAAGGTCAACAACACCCAGAAAACACTTTCCAAATTCGAAGAATACAGAGATTCAATCAAAGACAAAGCAACACAACATTCTAAGAAACATCCTCGTTGCATAGCAGATGGTAATGAGGTACTAAGGTTCCATTGCACCACTTTTATGTGCACATTAGGCCAAAGTGGCTCTTCCAACCTTTGCAACTTAACACCACAATGCAAAGCATGCAACATAATAAAGAATGGTTTCAAGGTCACAGGAGAAGAATCAAAGGGTATATTAACATATGCAACAAGTGGTAAGGCACATGAAAAGGTAGTTGATGAGAGTAATGAGAGAAGGGCAATGTTTCTTTGTAGGGTTATAGCAGGGAGGGTGAAGAAAAATGGTGCAGAAAGTGATAGCATGGAAGAAGAGTATGATTCTGTTGTAGTAGGTGATGATGGTGCTTATTATTCAAATTTTGATGAGTTATATGTTTTCAACCACACGGCTATACTTTCTTGCTTTGTTGTAATCTATAGAACTTTTTGA 1227 0.3635 MRKHRTHRRVTTINDLNQKPQKREKQKQTSWAVIKGSFTCKNVKVIEHQKQKKLQESKEKNNKCKQIKCPVSLCNEIKVMATGTPEDVHNKRDSKMMSGEYKNNVASYSSRSIKAPLNEINGLVYASSFSSSSISSASDSFRGMPLRKLSGCYEYTMVVDHVTGLTRDPSTLRGIICSYPYCDEFFMNPESFEYHHAIRHAVSELVPEDTSKNIVEIIFQSSWLKKQSPMYKIDRILKVNNTQKTLSKFEEYRDSIKDKATQHSKKHPRCIADGNEVLRFHCTTFMCTLGQSGSSNLCNLTPQCKACNIIKNGFKVTGEESKGILTYATSGKAHEKVVDESNERRAMFLCRVIAGRVKKNGAESDSMEEEYDSVVVGDDGAYYSNFDELYVFNHTAILSCFVVIYRTF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0468 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 406 - -
Lal22g0468 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 406 - -
Lal22g0468 408 Gene3D - 201 407 - -
Lal22g0468 408 SUPERFAMILY ADP-ribosylation 202 406 - -
Lal22g0468 408 ProSitePatterns Zinc finger C2H2 type domain signature. 177 200 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0468 Lal-Chr22 3106036 3107779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0468 141 408 C2H2 Transcription Factor Family AT1G75710 47.119 5.46e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0468 - - gmx:100814186 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0468 22 3106036 3107779 Lal22g0468 22 3106036 3107779 ECH