Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0449 ATGATTATGAAAACGTTGTTGAGTAAAGGAGATGCTAAAGTAAACACCTTCATTGATTCAATGAGAGCATCCTCTCCCACTAGACCAGAAAACCAAGATCAAACTCCTACTTGGATTTTTTATCATCCCTCGGCGTTGAAGATGTTTGATGAAATAGTATATAACTCGAGAGGGAAACAGATTGTGACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTTCAGATCCTGATAAAGCATTCATGACTGAAAAGATGAGAGCCACCCTCAAGGACATAGCAATGCATTTTCCCACCGCCATCGTGAGTGGAAGGTCCGTAGATAAGGTATATAACTTTGTGCAATTGAAAGAACTGTACTATGCCGGAAGCCATGGCATGGACATAAGGGGACCAACAAAAAGCCGAAGTCATAAGAAAATGAATGAAGGAGTGTTGTTCCAAGCTGCGAGTCAATTCCTACCCATGATGAATGAGGTTTACAAGATCTTGGTGGAAAAAACAAAGTCTGTCAAGGGGGCTATGGTAGAAACTAACAAGTTTTGCTTGTCAGTGCACTTTCGCTGTGTTGATGAAAAGGTACCGAATTGGGCAGCATTGGCAGAGAAAGTTAGATTGGTGCTGAATGAATACCCAAAGCTTAGGATTACCCAAGGGAGAAAAGTACTAGAGATCAAACCATCCATAAAATGGGACAAAGGCAAAGCTCTTGAATTTGTGTTAGAGTCATTAGGATACAATAATTCTAATAACGTGTTTCCAATCTATATCGGCGATGATCGAACTGACGAGGATGCTTTTAAGGTTTTAAGTAGTAGGAGCCTAGGAATTGGGATTCTTGTATCTCAAATTCCAAAAGAAACAAACGCTTCCTACACTTTACAAGATCCATCAGAGGTTGAACAATTTTTGCACCGCTTGGTAGAGTGGAGAAGAAAGAGTTCTCACTCACACAAGTTATACGTTGTAGACAACTTCAAGAAATTAACACTACCCTAG 1002 0.4012 MIMKTLLSKGDAKVNTFIDSMRASSPTRPENQDQTPTWIFYHPSALKMFDEIVYNSRGKQIVTFLDYDGTLSPIVSDPDKAFMTEKMRATLKDIAMHFPTAIVSGRSVDKVYNFVQLKELYYAGSHGMDIRGPTKSRSHKKMNEGVLFQAASQFLPMMNEVYKILVEKTKSVKGAMVETNKFCLSVHFRCVDEKVPNWAALAEKVRLVLNEYPKLRITQGRKVLEIKPSIKWDKGKALEFVLESLGYNNSNNVFPIYIGDDRTDEDAFKVLSSRSLGIGILVSQIPKETNASYTLQDPSEVEQFLHRLVEWRRKSSHSHKLYVVDNFKKLTLP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0449 333 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 10 321 IPR044651 GO:0004805|GO:0005992
Lal22g0449 333 TIGRFAM T6PP: trehalose-phosphatase 59 309 IPR003337 GO:0003824|GO:0005992
Lal22g0449 333 Gene3D - 61 158 IPR023214 -
Lal22g0449 333 Gene3D - 163 323 IPR023214 -
Lal22g0449 333 SUPERFAMILY HAD-like 64 311 IPR036412 -
Lal22g0449 333 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 10 321 - -
Lal22g0449 333 Pfam Trehalose-phosphatase 64 299 IPR003337 GO:0003824|GO:0005992
Lal22g0449 333 CDD HAD_TPP 64 301 - -
Lal22g0449 333 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 64 271 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0449 Lal-Chr22 2933525 2937182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0449 43 305 Trehalose Biosynthesis Gene Families AT1G23870 27.899 6.93e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0449 K01087 - gmx:100792915 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0449 22 2933525 2937182 Lal22g0449 22 2933525 2937182 ECH
Lal22g0449 22 2933525 2937182 Lal6g0483 6 3081580 3084205 LSH
Lal22g0449 22 2933525 2937182 Lal17g0420 17 2837743 2840201 PCT
Lal17g0420 17 2837743 2840201 Lal22g0449 22 2933525 2937182 PCT