Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0428 ATCATGAAGAAGAAAAGAAAAGGAACTGAGAATGAGGAATCCTCGAACCTGCTAGAGGTTTTTCATTCGGATCGTGGGTCGAATTTGAAATCCCATTATTCTCTGGAAGATTGTTCCAGGCTGAAGAAGAGGTGTACAGAACATGTTGACATAAAGTCAGCTTCTGTTTCCAACAAAAGTAGGGTTGCAGGTATTGCAACTGCTCCGCCTTGCGGGACTTCATCACTGATTACACCAGGAAGAGGGCTCAAGAGAAAGATAGGTTGCATTGGTGTGGCTACCCAGATGGGCAGGAAGAAGAAGATTGGGGATGATTATGTTACTGGGGCGAGGATCGGGCAAGGGAAGTTTGGGTCAGTTTGGTTGTGTCAGTCCAGGGTTGGTGGAGTGGAGTATGCATGTAAGACACTAAGGAAGGGGGAGGAGACGGTTCATCGAGAGGTGGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCACGCTGTGTATGAGGAAGCTGACTGCTTTCATCTCGTAATGGAATTGTGCTCTGGTGGGCGATTGATAGATAAGATGTTTAAAGAGGGCCCATGTTCAGAACACCGAGTAGCCAATATACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTCCACAGAGATATCAAACCTGAGAATATTCTGCTCACAGCATCGGCGAAAATAAAGCTTGCAGATTTTGGCCTGGCCATGAGAATTTCCGAGGGTAATATAAACTTCAAAATAATTCAACATCCAAGTCATTATGAATTAAAAAATGGCAAAACCAAATTTCCAGATCTTGGACGTGATCCGTCCTGTCTTGTGCATGACCCGGCTGCCAATTTACAAAACCACAGTCAGAACCTGACGGGTTTGGCTGGAAGCCCTGCATATGTTGCTCCAGAAGTATTGTCGGGCAAATATTCTGAGAAGGTGGATATATGGAGTTCTGGAGTGCTCCTGCATGCTCTGTTGGTCGGCAGTCTTCCATTTAAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGAATGACAACCTAGATTTCCAAACAGGGATGTGGGAGTCAGTATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATGTTTCAGCAAGGATAACAGCCGATGAAGTACTTAGGCATCCATGGATATTGTTATACACAGAGAGTACACCAAAGATGCTGACTGTTAAAACAAGATTGAAGCACCAAACTGGAGCTGCTTCCCACAAGTTTGCCCCTAGATTAAGAGGAAACATGATAGATGATGGCTCCCTTGATGGTTTTTCAAGCCAAGTTTCATTCTCTGAAAGTTGCAAGTCAGAAGATCAGGATGATTGTGTATTCATTGATGCACTAGCCACTGCAATTTCACATGTGAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGGTACCTCAAGTCCAATAGATCAGCATGGTTCATCTAACATAAAGGCTAACCTCTGTAAAGCATTTTGA 1524 0.4429 IMKKKRKGTENEESSNLLEVFHSDRGSNLKSHYSLEDCSRLKKRCTEHVDIKSASVSNKSRVAGIATAPPCGTSSLITPGRGLKRKIGCIGVATQMGRKKKIGDDYVTGARIGQGKFGSVWLCQSRVGGVEYACKTLRKGEETVHREVEIMQHLSGHPGVVTLHAVYEEADCFHLVMELCSGGRLIDKMFKEGPCSEHRVANILKEVMLVIKYCHDMGVVHRDIKPENILLTASAKIKLADFGLAMRISEGNINFKIIQHPSHYELKNGKTKFPDLGRDPSCLVHDPAANLQNHSQNLTGLAGSPAYVAPEVLSGKYSEKVDIWSSGVLLHALLVGSLPFKGDSLEAVFEAIKNDNLDFQTGMWESVSKPARDLVGRMLTRDVSARITADEVLRHPWILLYTESTPKMLTVKTRLKHQTGAASHKFAPRLRGNMIDDGSLDGFSSQVSFSESCKSEDQDDCVFIDALATAISHVRISEPKRSKLWGTSSPIDQHGSSNIKANLCKAF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0428 507 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 22 499 - -
Lal22g0428 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lal22g0428 507 SMART serkin_6 106 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0428 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 499 - -
Lal22g0428 507 ProSiteProfiles Protein kinase domain profile. 106 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0428 507 Pfam Protein kinase domain 290 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0428 507 Pfam Protein kinase domain 106 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0428 507 CDD STKc_CAMK 105 397 - -
Lal22g0428 507 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Lal22g0428 507 SUPERFAMILY Protein kinase-like (PK-like) 102 415 IPR011009 -
Lal22g0428 507 Gene3D Transferase(Phosphotransferase) domain 1 267 442 - -
Lal22g0428 507 Gene3D Transferase(Phosphotransferase) domain 1 97 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0428 Lal-Chr22 2783766 2786813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0428 106 448 EF-hand Containing Proteins AT1G50700 34.551 1.70e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal22g0428 Pkinase 4.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0428 - - gmx:100812729 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0428 22 2783766 2786813 Lal22g0428 22 2783766 2786813 ECH