Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0421 ATGTGGGAATGTCATGAAATTGACGATTCTGTCCCTAAACCCGACCCGGAACCCGATTCCTCCTTTCTCAACTTCGATCTCTTCTCTGCCCTCTCCAACCCCAAGGATTATTATAAAATATTGGAAGTGGATTACGATGCTACTGATGATGCTATTCGCTCCAATTACATTCGTCTAGCTTTGAAATGGCACCCTGACAAGCAAAAAGCCCAAGATTCCGCCACCTCACGATTCCAAGACATTAACGAAGCCTATCAGGTTTTGAGTGATCCCGTCAAAAGGAGGAATTATGATAAAAATGGGATGCTTTACGTCTATGATTACAATATCACTGATTATCTTAACCGTTACAAGGGCCTTATATTGACGTGCAATGGCCTCGGCATGAAGCATTCAATATGGTAA 405 0.4247 MWECHEIDDSVPKPDPEPDSSFLNFDLFSALSNPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKAQDSATSRFQDINEAYQVLSDPVKRRNYDKNGMLYVYDYNITDYLNRYKGLILTCNGLGMKHSIW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0421 134 PRINTS DnaJ domain signature 38 56 IPR001623 -
Lal22g0421 134 PRINTS DnaJ domain signature 56 71 IPR001623 -
Lal22g0421 134 PRINTS DnaJ domain signature 73 93 IPR001623 -
Lal22g0421 134 PRINTS DnaJ domain signature 93 112 IPR001623 -
Lal22g0421 134 CDD DnaJ 36 90 IPR001623 -
Lal22g0421 134 SUPERFAMILY Chaperone J-domain 32 121 IPR036869 -
Lal22g0421 134 SMART dnaj_3 35 93 IPR001623 -
Lal22g0421 134 Gene3D DnaJ domain 28 114 IPR036869 -
Lal22g0421 134 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 134 - -
Lal22g0421 134 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Lal22g0421 134 Pfam DnaJ domain 36 98 IPR001623 -
Lal22g0421 134 ProSiteProfiles dnaJ domain profile. 36 101 IPR001623 -
Lal22g0421 134 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0421 Lal-Chr22 2730864 2733281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0421 29 98 C2H2 Transcription Factor Family AT1G74250 44.000 2.33e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0421 - - gmx:100804409 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0421 22 2730864 2733281 Lal22g0421 22 2730864 2733281 ECH
Lal22g0421 22 2730864 2733281 Lal6g0448 6 2835961 2838185 LSH