Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0414 ATGCAGCACCCATCGAGACCCGAAGCGGAACACTTGCTAGGTATGGCTGAGAAGCTTTTACAAACACGAGATCTCAACGGTTCTCGTGAATTCGCTCTTCTCGCTCAAGAATCTGAGCCTCTTCTAGAAGGTCCTGACCAGATCTTAGCTATAGTTGATGTCCTTGTTGCATCTGAGAAGCGCGTCAACAACCACCCTGATTGGTACGCGCTTCTCGGCGTCGATCGACGCACCGATGATATCGAAGCGATGAAGCGCCAGTATCGCCGCCTCGCTCTCCTCCTTCACCCTGACAAGTCGCGTTTCACCTTCGCCGACCACGCTTTCAACCTCGTTGCTGACGCGTGGGCTGTACTCTCCGACCCAATTAAAAAAACACAATTTGATAGGGAGTTGTCTTACTTCACCCGTGTTGATCTCTCTGCTCCGGCCCAAGCCCAGGCCCAAACTCAGGCTCCTAGCTGGGTTCAGCAGGATAAGTTGCCGGTACGTAGAACCGGGCCTGGGCTTGGGTCTGGCTCGGGCGTTCGAAACAATGTTCCTCCTCAGGGGTTTGACTTTGATCCACGGAACAACAACGCTTCTGCCTCCGCCGTGAGGAATGAAATTGCCACGGAGGAGAGTTCACGGCGGAAGTCTGCGACGTTCTGGACCGCTTGTCCTTACTGTTACCGGCTCTATGAGTATCCTAGGGTTTATGAGGGTTGTGTGTTGATGTGCCAGAATTGTGAGAGGTCGATTCATGGAATTGAAGTTAAGTCTCTGCCCCCGCTTGTGCCAGGGCAAGATGCGTATTACTGCTGCTGGGGATTTTTCCCGATGGGGTTTGTTCTCGGAAATATTGATTCCAGTGAAAAGGAGAAAAATGCTGTGCCTGAGACTGAGCCTGTGCCACTGCAGCAGCCTGCGGCGACAGTGCTGCCCAATTGGATGCCTGCGCCAATGCCTCAGGCAATGCAGAATGGTGGAAACAATGCTCAACCAGAAGCTCTGAGGGTAACAAAGGCAGCTGCTTCGACCGGTGTTCAGAATGGGGCTCCTTCACGGGGAGGTGCTCCAAAGAAGCGAGGAAGGCCACGAAATATCTGCTGTAGAGTTGATTCAACTGGGATGGGGAAGAACGGTAGGGTTGAATTGGACAAGAGTTTCATTCTGGTTGTGAGTTCTCTACCGCGACAGCTCTATAGACACCTTATTATTGCTGCCATGGTTTACTTTTTTGCTTCATTTGGGATTCTCTACCCAAACCTTTCTTTTCTTTACCACCAACAAGGTGTTGGTCTATTAGTGTAA 1293 0.5143 MQHPSRPEAEHLLGMAEKLLQTRDLNGSREFALLAQESEPLLEGPDQILAIVDVLVASEKRVNNHPDWYALLGVDRRTDDIEAMKRQYRRLALLLHPDKSRFTFADHAFNLVADAWAVLSDPIKKTQFDRELSYFTRVDLSAPAQAQAQTQAPSWVQQDKLPVRRTGPGLGSGSGVRNNVPPQGFDFDPRNNNASASAVRNEIATEESSRRKSATFWTACPYCYRLYEYPRVYEGCVLMCQNCERSIHGIEVKSLPPLVPGQDAYYCCWGFFPMGFVLGNIDSSEKEKNAVPETEPVPLQQPAATVLPNWMPAPMPQAMQNGGNNAQPEALRVTKAAASTGVQNGAPSRGGAPKKRGRPRNICCRVDSTGMGKNGRVELDKSFILVVSSLPRQLYRHLIIAAMVYFFASFGILYPNLSFLYHQQGVGLLV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0414 430 MobiDBLite consensus disorder prediction 172 193 - -
Lal22g0414 430 MobiDBLite consensus disorder prediction 146 193 - -
Lal22g0414 430 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 359 - -
Lal22g0414 430 Pfam DnaJ domain 67 129 IPR001623 -
Lal22g0414 430 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lal22g0414 430 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Lal22g0414 430 SMART dnaj_3 66 124 IPR001623 -
Lal22g0414 430 CDD DnaJ 67 121 IPR001623 -
Lal22g0414 430 Gene3D DnaJ domain 55 150 IPR036869 -
Lal22g0414 430 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Lal22g0414 430 MobiDBLite consensus disorder prediction 338 365 - -
Lal22g0414 430 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 359 - -
Lal22g0414 430 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal22g0414 430 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lal22g0414 430 PRINTS DnaJ domain signature 104 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0414 Lal-Chr22 2689269 2692254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0414 8 276 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.686 1.34e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0414 - - aprc:113846655 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0414 22 2689269 2692254 Lal22g0414 22 2689269 2692254 ECH