Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0409 ATGCAGCACCCTAAAAAAGCTGAAGCTGAAAACATATTGGGAATTGCAGAAAAGCTCTTAAATACTCGTGATCTACAAGGTGCGCGAAAATTTGCTATACTTGCTCAAGAATTTGATCCTCTTATTGAAGGTCCTAATAGGATCCTAGCTATCATTGATGTTCTACTTGCATCTGAGAAACGAGTGAAGAACCACCATGATTGGTATGCCATACTCGGCGTTGATCATCGTTCCAATGACATCGACCCCATGAAGCGCCAATATTACCGCCTTGCCCTCCTCCTCCACCCTGATAAATCTCGCTTTCCTTTTGCCAAAGAAGCATTCAATCTCATAGTTGAAGCATGGAATGTACTTTCTGATTCTGTGAAAAAATCAGAATTTGACAAAGATTATTCATACTTTATCCCTGATAATCTTTCTGTCCCAGGACGAGTTCGACCAGAGAAGTTGCCAGTTCATAGGCGTGGGTATAGTTCCATGTCTGGTTCTAGCGTCCAGCATGAAACCACACCAGGTTTTAACTTCAATCAACTCAATAACAACGTGTCTGAAAAGGTTACTACGGAGGAGAATTTGTGGGGAATGAACGAAACGTTTTGGACTCCATGCCCTTACTGTTACTACCTATATGAGTACCCTAGGGTTTATGAGGATTGTAGTTTACAGTGTCAAAATTGTGAGAGATTCTTCCATGGAGTTGAGCTTGCGTCTCTTCCGCCACTTGTACCGGGGCAAGATGCTTACTACTTCAATTGGGGGTTCTTTCCAACGAGTTTTATATATAAAGGTAATAATTCAAAGAAGAAAGAGAAAGAGGTTGTGCCACCACAACAAAAGCAACCATGCCAGCCACAATAG 861 0.4181 MQHPKKAEAENILGIAEKLLNTRDLQGARKFAILAQEFDPLIEGPNRILAIIDVLLASEKRVKNHHDWYAILGVDHRSNDIDPMKRQYYRLALLLHPDKSRFPFAKEAFNLIVEAWNVLSDSVKKSEFDKDYSYFIPDNLSVPGRVRPEKLPVHRRGYSSMSGSSVQHETTPGFNFNQLNNNVSEKVTTEENLWGMNETFWTPCPYCYYLYEYPRVYEDCSLQCQNCERFFHGVELASLPPLVPGQDAYYFNWGFFPTSFIYKGNNSKKKEKEVVPPQQKQPCQPQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0409 286 Gene3D DnaJ domain 55 138 IPR036869 -
Lal22g0409 286 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lal22g0409 286 Pfam DnaJ domain 67 129 IPR001623 -
Lal22g0409 286 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 277 - -
Lal22g0409 286 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal22g0409 286 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lal22g0409 286 PRINTS DnaJ domain signature 104 124 IPR001623 -
Lal22g0409 286 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Lal22g0409 286 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Lal22g0409 286 SMART dnaj_3 66 124 IPR001623 -
Lal22g0409 286 CDD DnaJ 67 121 IPR001623 -
Lal22g0409 286 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0409 Lal-Chr22 2666158 2667018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0409 3 261 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.076 4.02e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0409 - - lang:109356467 392.119