Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0401 ATGCCTCATAAATGCACTTACATTTTTCCGAGGCGGTTTCCTGATAGGGAAGAATCTTACGATCACGAGAAGAAGAAAAACGTCAACTCTATCAAATCACGAGATACCTTTGGCGTTGAAAGTAACGCACCAAAAAAGCAACTAATAAATCAAACTAGTAATCAAAACGATGTCGTTTTCAATTCACCTAAACTCTCTGTCGTATCTGATATTTTCAATCCTCGTCATAAAGTTCAACGATCTAAACACAAACAAGTTTCTGCGTTTCGCGATTGGTTCATCCACAAAAAACGTGATACGAAGGTGAAGGATAATGATGATGATGATGATGAGGTGGGGGAAGAACGTGAGCTTCTGCTTCCGTTCAAGGATATTGACCGGAGTTTCGATCGGAATGTATCACTGCCGCGTTTATCGAGCGGAAGCAGTTATGCCGGTAGCTTGTTCTCCGGGACCGCCACGTTGGATGGCACCACCACTTTTTCCAGTGACATTACCAAAGATGATACGTTGTCGTATCGTGTCTCGAATGTCACCGCAACAATAATGCATGGGGAGGAGGAGGAAGAAGAAGATGAAGCGGTGGAAGAAAGTTATGCGAGGAAGTTAAGAGAAAGTAAGTACCTGCAGATGGCAATGGCGAAGAGGATCGGTTGTTTATCGAGCCTTGTGTCAGAACCTGTTCTCGCTGTTGATACTGGAATTGAAACCTGGGATGCTGAATCCGTTTCTTACCGTCTATGGGTGAGTGGGAGCTTGTCTTACACAGACAAGATATCAGATGGTTTTTATAACATATTAGGTATGAACCCGTATATGTGGGTTATGTGTAATGATGTAGAGGAAGGTAAGCGATTACCAACTTTAATGGCTCTCAAAGCAGTTGAACCCAGCGAGAGTTCCATTGAGGTTGTTCTTATTGATAGACAAGAGGACTCCACGCTTAAAGACCTTCACGATATAGCACAGGAGTTGCACTCTGATTCTGGGAACTCCTTGATGCTGGTTGAAAAACTGGGAAAGCTTGTTGCCATATGTATGGGGGGTACATTCTCAGTGGAGCAAGGAGATTTGCACAAGCGCTGGAAGCTGGTTAGTAAGAGATTGAGGAGTATTCACAAGTGTGTGGTACTTCCCATCGGAAGCTTATCTTCTGGACTTTGTAGGCATCGTGCTATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGCATAGCTCGTGGTTGCAGGTACTGTGCTTCAGATCATAGATCTTCTTGCCTTGTCAAGATTAAAGATGACAGGCAGCTCTCAAGGGAATACGTAGTTGACCTAGTTGGGGAACCAGGAAATGTCCATGGGCCAAATTCATCAATTAATGGAGCATATGCATCTCTGATGCCTTCTCCATTTCGAATTTCTCATTTAAAAGAATCTCAATCACCATATGTGGATGACACAACATTTTCTCAATCTATAAGTTCCAACCACAGTTCTATTATTCCGGAAAGTCACCCTTATGCAGAGAGTTCACAGGAAGCTCAACAAGTTAGAGAAACTAATTTGATGAGAAATTATAATGGCTCCAGTTATGCTTTGGTTGATCAAAGTTGTCAAGGTGTTTCTGGAGCTCTTTGTCCAACCTTTGAAGCATCATTACATGAATATCCAAGGCTTGGTAAGGATACAGTTGTGGTACAAGAAATTTCCAACAATGAGGATATTGTAAATGGAGGTTCTGGGGTGAAAAGTACCTTCACCCAATCTATACTGAGTTTATCCAGCCAGTTAGAACAGGAACAGGTAGAGAATGATAGAGTTGAAAACCAGGGGGGTGCTGGGAATATTCCAAGATACTTGGATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATTTCGTGGGATGATTTGCGGATTAAAGAGCGTATAGGCGCAGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTCGCCGTCAAGGTTTTAACAGTCCAGAATTTCCATGATGATCAGTTGAAGGAGTTTCTGAGAGAGGTTTCCATTATGAAGCGTGTTCGCCATCCAAATGTGGTGCTTTTCATGGGTGCGGTTACAAAACGTCCCCATCTATCTATTGTGACTGAGTATTTGCCAAGGGGGAGCTTATATCGTCTGATACACAGGCCAGCATCCGGTGAAGTTATGGATGCAAGGAGAAGATTGCGGATGATTTTAGACGTGGCTAAGGGGATCAACTATCTCCACTGTCTGAAGCCTCCAATTGTCCACTGGGATCTCAAATCCCCAAACCTCCTAGTGGACAAAAACTGGACTGTGAAGGTCTGTGATTTTGGATTATCCAGATTTAAGGCGAACACTTTCTTATCATCAAAATCATTTGCTGGAACTCCAGAATGGATGGCTCCAGAATTTCTTCGCGGAGAACGCTCAAACGAGAAGTCCGATGTTTACAGTTTTGGAGTCATCCTGTGGGAACTCGTTACCCTGCAACAACCCTGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGAAATGCCTCCAAACATCTCCCCAACATTGGCGACACTCATGGAATCTTGTTGGGCTGATGACCCTGCTGAACGCCCATCTTTTACTAGCATAGTTGACACGCTAAAGAAGCTGCTGAAGTCTCCAGCAGACACCTTTAAAATGTGTGGGAAATAG 2715 0.4387 MPHKCTYIFPRRFPDREESYDHEKKKNVNSIKSRDTFGVESNAPKKQLINQTSNQNDVVFNSPKLSVVSDIFNPRHKVQRSKHKQVSAFRDWFIHKKRDTKVKDNDDDDDEVGEERELLLPFKDIDRSFDRNVSLPRLSSGSSYAGSLFSGTATLDGTTTFSSDITKDDTLSYRVSNVTATIMHGEEEEEEDEAVEESYARKLRESKYLQMAMAKRIGCLSSLVSEPVLAVDTGIETWDAESVSYRLWVSGSLSYTDKISDGFYNILGMNPYMWVMCNDVEEGKRLPTLMALKAVEPSESSIEVVLIDRQEDSTLKDLHDIAQELHSDSGNSLMLVEKLGKLVAICMGGTFSVEQGDLHKRWKLVSKRLRSIHKCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPNSSINGAYASLMPSPFRISHLKESQSPYVDDTTFSQSISSNHSSIIPESHPYAESSQEAQQVRETNLMRNYNGSSYALVDQSCQGVSGALCPTFEASLHEYPRLGKDTVVVQEISNNEDIVNGGSGVKSTFTQSILSLSSQLEQEQVENDRVENQGGAGNIPRYLDLEPSLAMDWLEISWDDLRIKERIGAGSFGTVYRAEWHGSDVAVKVLTVQNFHDDQLKEFLREVSIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEVMDARRRLRMILDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFLSSKSFAGTPEWMAPEFLRGERSNEKSDVYSFGVILWELVTLQQPWSGLSPAQVVGAVAFQNRRLEMPPNISPTLATLMESCWADDPAERPSFTSIVDTLKKLLKSPADTFKMCGK 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0401 904 Gene3D Transferase(Phosphotransferase) domain 1 713 901 - -
Lal22g0401 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Lal22g0401 904 ProSitePatterns Protein kinases ATP-binding region signature. 640 661 IPR017441 GO:0005524
Lal22g0401 904 PRINTS Tyrosine kinase catalytic domain signature 708 721 IPR001245 GO:0004672|GO:0006468
Lal22g0401 904 PRINTS Tyrosine kinase catalytic domain signature 749 767 IPR001245 GO:0004672|GO:0006468
Lal22g0401 904 PRINTS Tyrosine kinase catalytic domain signature 815 837 IPR001245 GO:0004672|GO:0006468
Lal22g0401 904 PRINTS Tyrosine kinase catalytic domain signature 859 881 IPR001245 GO:0004672|GO:0006468
Lal22g0401 904 CDD STKc_MAP3K-like 640 888 - -
Lal22g0401 904 SMART serkin_6 634 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0401 904 Pfam Protein tyrosine and serine/threonine kinase 634 888 IPR001245 GO:0004672|GO:0006468
Lal22g0401 904 Coils Coil 586 606 - -
Lal22g0401 904 SUPERFAMILY Protein kinase-like (PK-like) 616 887 IPR011009 -
Lal22g0401 904 ProSiteProfiles Protein kinase domain profile. 634 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0401 904 Pfam Ethylene-responsive protein kinase Le-CTR1 240 448 - -
Lal22g0401 904 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 155 902 - -
Lal22g0401 904 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 155 902 - -
Lal22g0401 904 Gene3D Phosphorylase Kinase; domain 1 627 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0401 Lal-Chr22 2619538 2628074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0401 1 903 MAP Kinase Kinase Kinase AT4G24480 55.083 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal22g0401 PK_Tyr_Ser-Thr 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0401 - - gmx:100786546 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0401 22 2619538 2628074 Lal22g0401 22 2619538 2628074 ECH