Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0394 ATGGAGAACAACCAATCTTTCTCTTCCAATTCCCGCGATACTTCTCCCACTTCACGCGATGCTGTTATCGACAACAACAACCATCACTCCTACAAGGTCAAATTCATCTGCTGCTATGGCGGTAAGATTCAACCTCGCCCTCATGATAACCACCTCTCCTATCTCGGCGGTGATACCAAAATCCTCGCCGTCGATCGCAACATCAAATTCGACTCATTCATGTTCAAACTCTCTTCCCTCGCCAACAATGCTAACATTTGCTTCAAGTACCAACTCCCCGGCGAGGACCTCGACGCTCTCATCTCCGTCACAGATGATGAAGATCTCCACCACATGATGGTTGAGTACGATCGTCTATCACGCGTTTCTCCAACCAAACCCGTCAGAATGAAGCTCATACTCTTCCCTCTCATTAACAACGCTGTTTCTGTTTCTGTTTCTGTTTCTTCTCCGTTCCAGAATCCAGATTTTATGTTCGTTGACGCGCTCAATTCTGCTCAGATTCCACATCTGGAACGATCTTCTCCGTCGCCGAATCCGGATTTTCTGTTCGGGTTCGATAATGTGCATTCAAAACCGCCAGACACGGCGTCGTATCCGACGGTTCCGGATTCAGAATGTGAGCCCGGGGAGAGAAAAACGGTTGAAGAACCTAATGCTGTTGTTGCTGGTGCTCAGAACCAGATCCAAGAGGAGTTACAGAAATTGAAGATAGTGAATAACAACAATGAGCAACAACTTCTTCTTCATCCGTTGAAAATCAACGATAAAAACGGCGATGTTAACGGCGTGGACTGTTACGGTCAAAACATTCCAGAAAAGGTAACACGGTTAACGGCAAATTCTCATAATTCTGTTGTCCAGCTTCAACGTCCTGGTCCGGTTCATGCGCCTTTTTTGCCAGGTGGTAGTTATACTGAACCGGGTCCGGTTTATCTGATTCAAACCGCGTCTGGGTTATACCAAGCGGTTCGACCCGTAACTGTGGGCCCTACTTACTATGCTATGCCGAGAATGGTTACAGCTACTGATTCTGGCGAAATGTACAATACGGCGTCGCTTTCTCATTCAGCGTCGAATATTGTTGCTGCTTCACAGGTTGGGGTTCCGCATTTGCCTGAGAAATCTGTTGTGTGCATACTCTATGGATTCATGCAATTGTGGAGTGTAATTAGTCTCTCTCGTTATTATGTGATTGTTCTATACGCTGTTAATGTCCCATTGCAATTCTTTGGTGAGTTTGTTAGGATGGCTTTAAATTATGGTTATGGTGTGAGGTTTTGA 1284 0.4579 MENNQSFSSNSRDTSPTSRDAVIDNNNHHSYKVKFICCYGGKIQPRPHDNHLSYLGGDTKILAVDRNIKFDSFMFKLSSLANNANICFKYQLPGEDLDALISVTDDEDLHHMMVEYDRLSRVSPTKPVRMKLILFPLINNAVSVSVSVSSPFQNPDFMFVDALNSAQIPHLERSSPSPNPDFLFGFDNVHSKPPDTASYPTVPDSECEPGERKTVEEPNAVVAGAQNQIQEELQKLKIVNNNNEQQLLLHPLKINDKNGDVNGVDCYGQNIPEKVTRLTANSHNSVVQLQRPGPVHAPFLPGGSYTEPGPVYLIQTASGLYQAVRPVTVGPTYYAMPRMVTATDSGEMYNTASLSHSASNIVAASQVGVPHLPEKSVVCILYGFMQLWSVISLSRYYVIVLYAVNVPLQFFGEFVRMALNYGYGVRF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0394 427 MobiDBLite consensus disorder prediction 1 24 - -
Lal22g0394 427 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 354 - -
Lal22g0394 427 Gene3D - 53 134 - -
Lal22g0394 427 Pfam PB1 domain 50 135 IPR000270 GO:0005515
Lal22g0394 427 SMART PB1_new 47 137 IPR000270 GO:0005515
Lal22g0394 427 Coils Coil 222 246 - -
Lal22g0394 427 MobiDBLite consensus disorder prediction 194 214 - -
Lal22g0394 427 PANTHER OS05G0427100 PROTEIN-RELATED 1 354 - -
Lal22g0394 427 SUPERFAMILY CAD & PB1 domains 48 136 - -
Lal22g0394 427 CDD PB1_UP2 36 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0394 Lal-Chr22 2575580 2579059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0394 24 191 MAP Kinase Kinase Kinase AT3G46920 36.842 1.85e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0394 - - lang:109338577 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0394 22 2575580 2579059 Lal22g0394 22 2575580 2579059 ECH
Lal18g1194 18 14814213 14815436 Lal22g0394 22 2575580 2579059 LSH