Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0366 ATGCCTTGCATCGCCGTCAATTCAAATCCTCAGAAGCGCAAATTAAGATCTCATGTCGTGGCTTCGGAGGCTTCAATCCCTTCCCCGTGCAAACGGAAACTTCCGCGGCGGTGCAACAATGCGAGCCTCCTTACTTCTCCTACTGAAAACGACGTCATTTCGATTCCTTGTGGTCATAAACAAGCTGAGTCGGATAATGTTGCTGCCAAATTGGAACGGGATTACAAAGATGATGAGCAATTGAGGGCGGTGAAGGAGAAGTTGCATGTGTCTACTGAACCTTCTAGAATTGCATGCCGTGAGGATGAGAAGAATATGGTGTTGGAGTTTTGCGAGGCATGTGTTGAGCAAGAGAAGGCTGGGAGCTTGTACATTTGTGGATGTCCTGGAACCGGAAAATCATTAACTATGGAGAGAGTGAAAGGGCTCTTACTCAATTGGGCTACAGAGGCAGGTTTTGTGCAGCCAGATGTTTTATCTGTAAACTGTACTTCATTTGTCAACACATCTGACATTTTCACCAAGATACTTGAGTTTAACCAGTCAGTTGGAAAAAAGCTTTCAGCAACACCCTTAAAACAACTCCAGAACATGTATTCTCAGAAGTCATCTAGAAAGAACATGATGTTGATACTTGCTGATGAATTAGATTATCTAATAACCAAAGACCGCGCTGTGCTCCATGATCTTTTCATGCTCACCACCTTACCATTTTCCAGATTTATATTAATAGGGGTAGCAAATGCGATTGACCTAGCTGATCGTTTTCTTCCAAGGCTTGCATCATTAAACTGCAAACCTTTTGTTGTAACTTTTCGGGCATACTCTAAAGATCAGATCCTTAGGATTCTACAAGAAAGACTAAGTGAACTTCCTTACAGTGTCTTCCAACCTCAAGCACTGGAGCTATGTGCCAGGAAAGTTGCGGCAGCCTGTGGAGATATGCGGAAAGCCCTTTGCATATGCAGGAGTGCAGTAGAGATGCTAGAAGCTGAGATTAGAGAATCTACCAGCAATTCAAATACTTCATTGGAAGAGAAAGCATCATCTGAACTAAAGACTGCCATAACTTCTGTTTATATGATGAAACATGAATTTGATACTGTAAGGATTGATCATATGGCTCTTTCCCTGTCAAAGACATATAGATCACCGGTGGTGGACACAATACAATCTTTGCCTCTTTATCAGCAGATCGTACTGTGCTCATCCATGAAACATTTCTGTGGAACTAAGAAAGATACAATCCTTGGCGAGTTGTATAAATCTTACACAAGTATATGCAAATCATCACAAATTCAACCGGCTGGATTCTTGGAATTTTCAGATATGTGCAGAGTGCTTAATGACCAGGGGCTCATTAAACTAGGACAATCCCGAGAGGATAAATTGAAAAGGGTGACACTAAAAGTAGATGAAGCTGATATTACTTTTGCATTGCAGGTAATCTTGTCATTTAAGCCATTAGATGATATAATGGATTGTTCACACATCTTAATAATTCTTTGCCATAAATACATGATGCAGGGAATCCGTTTTTTCCAAAACTGTCTTCAATGA 1560 0.4103 MPCIAVNSNPQKRKLRSHVVASEASIPSPCKRKLPRRCNNASLLTSPTENDVISIPCGHKQAESDNVAAKLERDYKDDEQLRAVKEKLHVSTEPSRIACREDEKNMVLEFCEACVEQEKAGSLYICGCPGTGKSLTMERVKGLLLNWATEAGFVQPDVLSVNCTSFVNTSDIFTKILEFNQSVGKKLSATPLKQLQNMYSQKSSRKNMMLILADELDYLITKDRAVLHDLFMLTTLPFSRFILIGVANAIDLADRFLPRLASLNCKPFVVTFRAYSKDQILRILQERLSELPYSVFQPQALELCARKVAAACGDMRKALCICRSAVEMLEAEIRESTSNSNTSLEEKASSELKTAITSVYMMKHEFDTVRIDHMALSLSKTYRSPVVDTIQSLPLYQQIVLCSSMKHFCGTKKDTILGELYKSYTSICKSSQIQPAGFLEFSDMCRVLNDQGLIKLGQSREDKLKRVTLKVDEADITFALQVILSFKPLDDIMDCSHILIILCHKYMMQGIRFFQNCLQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0366 519 Gene3D - 77 263 IPR027417 -
Lal22g0366 519 Gene3D - 264 390 - -
Lal22g0366 519 PIRSF Cdc6 6 519 IPR016314 GO:0006270|GO:0051301
Lal22g0366 519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 337 IPR027417 -
Lal22g0366 519 CDD AAA 100 260 - -
Lal22g0366 519 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 8 516 - -
Lal22g0366 519 SMART AAA_5 119 266 IPR003593 -
Lal22g0366 519 Gene3D - 391 485 IPR036388 -
Lal22g0366 519 CDD Cdc6_C 394 476 IPR015163 -
Lal22g0366 519 SUPERFAMILY "Winged helix" DNA-binding domain 386 486 IPR036390 -
Lal22g0366 519 Pfam AAA lid domain 296 331 IPR041083 -
Lal22g0366 519 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 8 516 - -
Lal22g0366 519 Pfam CDC6, C terminal winged helix domain 401 479 IPR015163 -
Lal22g0366 519 Pfam AAA domain 118 236 IPR003593 -
Lal22g0366 519 SMART Cdc6_C_2 401 480 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0366 Lal-Chr22 2353235 2359591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0366 6 487 Core DNA Replication Machinery Family AT2G29680 56.548 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0366 K02213 - gmx:100791200 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0366 22 2353235 2359591 Lal22g0366 22 2353235 2359591 ECH