Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0348 ATGCAAAGCCAATCCGAGTCACCCGACAAGCCCAAGAACTCACTGAGTCAACTCGTTCAAAACATGTTGTCCAACAATAACATCATGCCAGTAGCCATAGTTTCCTTGCTCCTAGTCATCCTCTTCGTCCTCCTTCTCCACGTGTATGCCAAGTTCTTCTTAGCTCCGGCACAACCTCGCCGCCGAATAACTCCGGCCACCGTCGAACCTTCCCGGTTCCACCACTTTCACTTCATAGAAACCTCACCCATTTCGACAAAAGGACTCGACTCTTCAACAGTTTCGAGGATTCCCATGTTTGTATATAAATCAGAAACAAAGGAATTGGGTACGGAGGAATTGGAATGTGTGATTTGTTTGAGTGGTTTTGAGGAAGGTGAGATCGGAAGAAGGTTACCAAAGTGTGGCCACACTTTTCATTTGGAATGCATTGACATGTGGTTAAGTTCACATTGCACTTGCCCAATTTGTAGAGATCCTATTGTGGTCCAAAACAATGATGGTGATGATGATGTACTTCAGATTGTGATTGGAACTCCAAGTTATGTGATTAGTGAGGGAGAGAGTGTGAATGATAATTATGGAAGTAGTGGTTCTAGTGTTTCACAAACTTCATCATCTTTGTTATTGGCTTGTTCTTTGAAGAGAATGCTAAGTAAAGTTTTTCAATCTTCCAATGTAAATGAATTAGATGGTTCACAATGA 705 0.4213 MQSQSESPDKPKNSLSQLVQNMLSNNNIMPVAIVSLLLVILFVLLLHVYAKFFLAPAQPRRRITPATVEPSRFHHFHFIETSPISTKGLDSSTVSRIPMFVYKSETKELGTEELECVICLSGFEEGEIGRRLPKCGHTFHLECIDMWLSSHCTCPICRDPIVVQNNDGDDDVLQIVIGTPSYVISEGESVNDNYGSSGSSVSQTSSSLLLACSLKRMLSKVFQSSNVNELDGSQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0348 234 CDD RING-H2_EL5_like 115 158 - -
Lal22g0348 234 Pfam Ring finger domain 115 158 IPR001841 -
Lal22g0348 234 SMART ring_2 116 157 IPR001841 -
Lal22g0348 234 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 228 IPR044675 -
Lal22g0348 234 PANTHER - 6 228 - -
Lal22g0348 234 SUPERFAMILY RING/U-box 105 167 - -
Lal22g0348 234 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Lal22g0348 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 162 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0348 Lal-Chr22 2221087 2221791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0348 4 158 Rapid Response to Elicitors AT3G16720 35.849 5.41e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0348 - - aprc:113874423 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0348 22 2221087 2221791 Lal22g0348 22 2221087 2221791 ECH