Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0344 ATGGCTGCAGCCTTGGACTGCTGGTCCAACCGCACCACCACCACCACCACCACCACCGACGATGACACCGTGGAACAAGTCCTCATGAGGTCCCACCATAGATCCGAGGTACCCATAACCCCTTCACTCTCTTCATCTTCTTCCTCAACAAAAGACTCTTCTTTGCTTCACAACAAGTTACAGAAGCTGAGTCGCAACGTTTCTGAAGCCATAGCATCATTCAAAAATTCCCTCAATCGTGACCCATCTTCTTCAAAGATCGAAGCTTCTAGAAAAATCACATGGGGTACTGTTGTTAGGAACCTTACTCTACTCTACCCTGGAAGCCAGCTTCCTGAGAAGCTCATGTCTAATATTCGCAACCACTATGATTCCTTGCCTCTCAGTTATGGACAGGCAGAATTTGATATGAAAGATGTGTTTCTTCACATCAAGCTGATAGAGCAAGCATCTGAGACTGAACAACCTGCGATTTTGTTCCAAGAAGAATCTGATAATGATGGTGAACTTCAAGGGTCTTTGTTGAAGCTCACTTTTGCTTGTAACTCCCCAATTTCATGGCCTGCAATGTTAAGTGCATTGGATAGTTCATCCATCAGTTGCAAGAAGACGCAGATCTTTGAGAAGAAAGGTTTCACCTTGGGGATTGTTATTCTTGTTTTTCATTCTGAGCAAGATAGATTGGTTAGAATGCAAACCGAAAACGCTATAAAGTTTGCCATGAAGAAGCCAAAAACCAGTTCTGTGAAGCTTCCGTTTGGACTTTGTGGATGTCAAGAAGAGAACTTCAAGGGGAGAGAACTTGGAGAGAGTGAAGAAATCAGTGGTGATGCATGTCATGGGAAGGAGTTTGAGAATTCGAGCCAAAAGATTCAGCTTCAGACGCCATTGCCTAGTTCATCTTTTATTGTATCAGTAGATGAATGGCAGACAATTCAGTCAGGAGGGAAAAATATTGAGAAATGGTTATTGAATTCTGATGGTGTTGAGTTTACTGATCAGATTGGATTTGGACCTCATTCTTATAAAGGGGTCTACATGGGGAAAAGGGTTGGGATTGAGAAGCTTAAAGGGTGTGACAAAGGGAATTCCTATGAGTTCGAGCTCCGAAAAGATCTGTTGGAACTGATGACTTGTGGTCATAGAAACATTCTGCAATTTTGTGGTATTTGTGTGGATGATAATCATGGCTTGTGTGTGGTGACCAAGTACATGGATGGTGGATCTGTTCATGATTTGATGTTGAAGAACAAGAAACTCCAGGTTAAACATATTGTAAGAATAGCAGTAGATTTGGCTGAGGGGATGAAGTTTATGAATGATCATGGTGTTCCATATAGAGACCTCAATACTCAGAGAATTCTATTGGATAGGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTATTGAAGAAGCAATGGAGTATGAAACTGATGGTTACAGGTGGCTAGCTCCAGAGATAATAGCAGGTGACCCAGAGAGTGTGAGAGAGACATGGATGAGTAATGTTTATAGTTATGGAATGGTGATTTGGGAAATGGTAACTGGTGAAGCAGCTTATTCAGCACTTTCACCAGTGCAAGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCTGAAATCCCCAAAGATTGTCCTCAAACACTAAAATATCTTATGACAAAGTGCTGGCACAACACCCCTTCAAAACGTCCTCACTTTTCTGATATCTTAGCAATGTTACTGCGACCAAACAACAATAGGTAA 1767 0.4244 MAAALDCWSNRTTTTTTTTDDDTVEQVLMRSHHRSEVPITPSLSSSSSSTKDSSLLHNKLQKLSRNVSEAIASFKNSLNRDPSSSKIEASRKITWGTVVRNLTLLYPGSQLPEKLMSNIRNHYDSLPLSYGQAEFDMKDVFLHIKLIEQASETEQPAILFQEESDNDGELQGSLLKLTFACNSPISWPAMLSALDSSSISCKKTQIFEKKGFTLGIVILVFHSEQDRLVRMQTENAIKFAMKKPKTSSVKLPFGLCGCQEENFKGRELGESEEISGDACHGKEFENSSQKIQLQTPLPSSSFIVSVDEWQTIQSGGKNIEKWLLNSDGVEFTDQIGFGPHSYKGVYMGKRVGIEKLKGCDKGNSYEFELRKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKYMDGGSVHDLMLKNKKLQVKHIVRIAVDLAEGMKFMNDHGVPYRDLNTQRILLDRHGNACLGDMGIVTACKSIEEAMEYETDGYRWLAPEIIAGDPESVRETWMSNVYSYGMVIWEMVTGEAAYSALSPVQAAVGIAACGLRPEIPKDCPQTLKYLMTKCWHNTPSKRPHFSDILAMLLRPNNNR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0344 588 MobiDBLite consensus disorder prediction 37 55 - -
Lal22g0344 588 Gene3D Transferase(Phosphotransferase) domain 1 323 585 - -
Lal22g0344 588 PANTHER SERINE-THREONINE PROTEIN KINASE 1 585 - -
Lal22g0344 588 MobiDBLite consensus disorder prediction 1 55 - -
Lal22g0344 588 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 585 - -
Lal22g0344 588 MobiDBLite consensus disorder prediction 7 24 - -
Lal22g0344 588 SUPERFAMILY Protein kinase-like (PK-like) 305 581 IPR011009 -
Lal22g0344 588 Pfam Protein tyrosine and serine/threonine kinase 366 580 IPR001245 GO:0004672|GO:0006468
Lal22g0344 588 ProSiteProfiles Protein kinase domain profile. 329 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0344 588 PRINTS Tyrosine kinase catalytic domain signature 402 415 IPR001245 GO:0004672|GO:0006468
Lal22g0344 588 PRINTS Tyrosine kinase catalytic domain signature 438 456 IPR001245 GO:0004672|GO:0006468
Lal22g0344 588 PRINTS Tyrosine kinase catalytic domain signature 508 530 IPR001245 GO:0004672|GO:0006468
Lal22g0344 588 PRINTS Tyrosine kinase catalytic domain signature 552 574 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0344 Lal-Chr22 2191700 2195268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0344 320 581 MAP Kinase Kinase Kinase AT2G17700 33.835 8.98e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lal22g0344 PK_Tyr_Ser-Thr 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0344 - - gmx:100801110 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0344 22 2191700 2195268 Lal22g0344 22 2191700 2195268 ECH
Lal18g1250 18 15175012 15185238 Lal22g0344 22 2191700 2195268 LSH
Lal5g0988 5 12139016 12143535 Lal22g0344 22 2191700 2195268 PCT
Lal22g0344 22 2191700 2195268 Lal5g0988 5 12139016 12143535 PCT