Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0340 ATGTCAAAGGTGGTATGCGTTACCGGCGGTAGTGGGTGCATTGGGTCATGGCTGGTGCATCTCCTTCTTGATCGTGGCTACACCGTTCACGCTACCGTCAAAGATCTCAACGATGACGCCGAAACCAAGCATCTTCAAGCCCTAGATGGAGCTGCCACCCGTCTCCGCCTCTTCCAGCTCGATCTCCTCCGCTACGATACTGTCTCCGCCGCTATCAATGGCTGCGTCGGTGTTTTCCATCTTGCCTCCCCTTGCATTGTCGACCAAGTTCACGACCCTCAGAAGGAGCTTCTGGACCCGGCTATTAATGGAACGATGAATGTGCTTAAGGCGGCGAAGGAAGCAGGGGTGCAGCGCGTGGTGGTCACTTCTTCCATCTCGGCTATTACACCGAGCCCTAGTTGGCCTTCTGATGTTGTCAAGACAGAAGATTGCTGGACTGATGTTGAATACTGTAAGCAAAAGGGGTTGTGGTATCCATTGTCAAAGACATTAGCTGAAAAAAGTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTACACCCAGACTCAATGCAAGCATGCTCATGCTTGTGCGCCTTCTTCAAGGCTGCGATGAAACATACGAGGACTTTTTTATGGGGTCGGTTCACTTCAAAGATGTAGCCTTGGCACATATTTTGGTGTATGAGAACAAAGCAGCATCTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCACTACGGTGACTTTGTGGCAAAAGTTGCTGAACTTTATCCAGAGTATAATGTGTCGAAGATTCAACGAGATACCCAACCAGGATTGTTGAGAGCAAAGGATGGAGCCAAGAAGCTTTTGGATATGGGTTTGCAATTCATTCCAATGGATCAAATTATTAAGGATGCCGTAGAGAGTTTGAAGAACAAAGGGTTCATTTCTTAA 963 0.4798 MSKVVCVTGGSGCIGSWLVHLLLDRGYTVHATVKDLNDDAETKHLQALDGAATRLRLFQLDLLRYDTVSAAINGCVGVFHLASPCIVDQVHDPQKELLDPAINGTMNVLKAAKEAGVQRVVVTSSISAITPSPSWPSDVVKTEDCWTDVEYCKQKGLWYPLSKTLAEKSAWDFAKENGLDVVVVNPGTVMGPVITPRLNASMLMLVRLLQGCDETYEDFFMGSVHFKDVALAHILVYENKAASGRHLCVEAISHYGDFVAKVAELYPEYNVSKIQRDTQPGLLRAKDGAKKLLDMGLQFIPMDQIIKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0340 320 Gene3D - 1 320 - -
Lal22g0340 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Lal22g0340 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Lal22g0340 320 CDD FR_SDR_e 5 297 - -
Lal22g0340 320 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
Lal22g0340 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0340 Lal-Chr22 2159354 2165103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0340 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.673 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0340 - - gmx:100803241 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0340 22 2159354 2165103 Lal22g0340 22 2159354 2165103 ECH