Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0339 ATGGGATACACTTCATTGCGTAGAAACCCAAAGAAAGAAGAACAACAAGTACCCGACACTATCACCCAGCCTTATGCTCATGAAGAATTCAATATCTTGGATGAACTTGATGGGGTCTTGGACATTGAAGAACAACATGAAACTTCAAGTGGTAAGCTTCATTGGGATTTCATGGAATGGGAAGAATTTCCAACCATTGGAGAGGAACCAGAAGATGATGAAGGGAAATATAACAGCATAAACAAAAGCATTTTGAAGGAGAAGCAGATAAAGAGAGAAAACATTTTTGGGTTTTGTGAAGTGAATGATGAAAAGATGATGGCTTTAAATTTGAACTTGAACTATCAAGATGTTTTGGATGCATGGTGTGACCGTAGGTCTCCTTGGGCTGATGATTATTCTTTTTCAATGGCCACCAATAATTGCTACAATATGGGGGAAGTGCCAATATTGGAAGAAGAGAGAAGAAGAAGGAAAGCAAGTGTTCTTAGGTACAAAGAGAAGAAGCAGAACAGATTGTTTTCTAAGAAGATAAGATACCAAGTTAGGAAACTAAATGCTGATAAAAGACCCAGAAACAAGGGTCGCTTTGTGAAGAGACATTGA 606 0.3812 MGYTSLRRNPKKEEQQVPDTITQPYAHEEFNILDELDGVLDIEEQHETSSGKLHWDFMEWEEFPTIGEEPEDDEGKYNSINKSILKEKQIKRENIFGFCEVNDEKMMALNLNLNYQDVLDAWCDRRSPWADDYSFSMATNNCYNMGEVPILEEERRRRKASVLRYKEKKQNRLFSKKIRYQVRKLNADKRPRNKGRFVKRH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0339 201 Pfam CCT motif 158 200 IPR010402 GO:0005515
Lal22g0339 201 ProSiteProfiles CCT domain profile. 158 200 IPR010402 GO:0005515
Lal22g0339 201 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 201 - -
Lal22g0339 201 PANTHER CCT MOTIF FAMILY PROTEIN 3 201 - -
Lal22g0339 201 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0339 Lal-Chr22 2151655 2157794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0339 108 200 C2C2-CO-like Transcription Factor Family AT1G25440 43.750 1.23e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal22g0339 CCT 4.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0339 - - aprc:113847792 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0339 22 2151655 2157794 Lal22g0339 22 2151655 2157794 ECH