Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0331 ATGTCTTTTAGTGCTTTTCAATGGTTAAGCCTTGTAGGCATAATCTGGCTCCAAGCCATAAATGGAACAAACACCAATTTCCCTGCTTATTCCTCCCAGCTGAAGCAGCTTCTTTCCATGTCACAATTACAACTCAATAGTCTTGCTTTTGCTTCTGATGCTGGCAAACTTTTTGGCTTCTTTTCTGGCATGGCTTCTGTTTACCTACCCCTTTGGCTTGTCCTCATGATAGGTTCAACTCTTGGATTAATTGGTTATGGTGTGCAATATCTCTTCATAACAAACCAAATTTCCTCTTTGTCATATTGGCATGTCTTTTTATTAACTATTCTTGCTGGGAATAGCATTTGTTGGATCAACACTGTCTGCTATGTTGTTACCATAAGGACTTTCTCATCTGATAGCCAAGTTGCTGTTGGATTAACTACAAGTTACCAAGGATTAAGTACCAAGATTTATACCAACATTGTTGGTGCTATTTCAGGACACAAAACAGCTACAACCTTTCTCTTTCTGAACTCTATCTTACCTGTTATAGTAAGCCTAATAGCAGCACCTCTAGTTAGAGAAATTGGAGTCACAAGGCCTAAATATATAAACATTGGTTTTGTTGTTATGTTTGTTATTACAATTGCAACTGGAATATATGCTGTTATCAGCAGCTTGCAATTTGTGACAAGTAAAATATCTCCACTTGATAGCCTGGTTGTTATTCTGGTGACCCTTTTGCTACCTCTATTAGTTCCAATTTCATTGAAGATCAAGGAACTAGTGGAGTCTTGGCAAACCAAGAGAGAAAGACTAAGGGTATTTCATTTTACTGCAGAGGAGAGTACAAATGAGGAAAGGACTGAAAATGAGGTGAAGGAGTCTAAAGATAGCAGAGAAATTAAAGAGGTGGGTATAAGGGAAGAAATTGGAGTGAATTTGATGGTTAAAAGAATAGATTTTTGGTTATATTTCTCTGTCTATCTTTTTGGTGCAACACTTGGACTAGTGTTTCTGAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGTTCTGCTACTTTATCATTGGTGTCTTTATCTTCCTCTTTTGGATTCTTTGGGCGTCTAATGCCAGCTCTTATGGACTACTTTTGCAGGGGTAGGTATAAAATATCAAGACCAGCTTCTATGGCGGCAATGATGGCTCCAACAGCCGGAGCATTTTTCTTACTTATGAACAAAACTCACATTGCCCTCTACACCAGCACTGCCATAATTGGAGTATGTACTGGAGCAATCACTTCCATTTCTGTTTCTACTACCACCGAGTTATTTGGCACAAAGAATTTTTCTGTGAACCATAACGTAGTTGTAGCCAACATTCCAATAGGTTCCTTTCTTTTTGGTTACTTGGCTGCCCTTGTTTACCATAAGGAAGGACATGAACAACATGGGAAGTGCATGGGCATGGCATGTTACAGAAACACTTTCTTTGTCTGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTATTCAGTAAAACTATAG 1551 0.3881 MSFSAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSMSQLQLNSLAFASDAGKLFGFFSGMASVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTILAGNSICWINTVCYVVTIRTFSSDSQVAVGLTTSYQGLSTKIYTNIVGAISGHKTATTFLFLNSILPVIVSLIAAPLVREIGVTRPKYINIGFVVMFVITIATGIYAVISSLQFVTSKISPLDSLVVILVTLLLPLLVPISLKIKELVESWQTKRERLRVFHFTAEESTNEERTENEVKESKDSREIKEVGIREEIGVNLMVKRIDFWLYFSVYLFGATLGLVFLNNLGQIAESRGCSATLSLVSLSSSFGFFGRLMPALMDYFCRGRYKISRPASMAAMMAPTAGAFFLLMNKTHIALYTSTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPIGSFLFGYLAALVYHKEGHEQHGKCMGMACYRNTFFVWGSLCFFGTFLALILHARTRKFYSVKL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0331 516 Pfam Nodulin-like 7 250 IPR010658 -
Lal22g0331 516 Gene3D MFS general substrate transporter like domains 229 508 IPR036259 -
Lal22g0331 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 514 - -
Lal22g0331 516 SUPERFAMILY MFS general substrate transporter 5 191 IPR036259 -
Lal22g0331 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 4 514 - -
Lal22g0331 516 SUPERFAMILY MFS general substrate transporter 232 510 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0331 Lal-Chr22 2105978 2108694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0331 1 515 Nodulin-like Gene Family AT2G30300 48.762 2.44e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0331 - - gmx:100808034 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0331 22 2105978 2108694 Lal22g0331 22 2105978 2108694 ECH
Lal18g1271 18 15330812 15333030 Lal22g0331 22 2105978 2108694 LSH