Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0328 ATGGCTGCTTCTCATGTCCAATACTTGGTCGTGCTTGTTATGGTCCATTTTGCAACATTATATGTTATCCCTACACATGCAAATTTGACTCCTGAATATTATGACAAAGTTTGCCCTCAAGCATTGCCAACCATAAGGTCTATTGTTGAGAAAGCAATTATTAGTGAGCATCGCATAGGAGCTTCTTTACTGCGTTTGCACTTCCATGACTGCTTTGTTAATGGTTGTGATGCTTCAGTTCTACTAGATGATACTCCTTTCTTCTTGGGCGAGAAGAGTGCATTACCAAATAGAAACTCATTGAGAGGGTTTGAAGTGGTTGATGAGATTAAAGAAGCTGTTGATAAAGTTTGCAAACACCCTGTGGTATCATGTGCTGATATCTTGGCTATTGCAGCTCGTGATTCTGTAGCCATTTTGGGAGGACAAACATATTGGTACGAAGTGTTATTAGGCAGAAAAGATGCAAGAACTGCATCAAGGGATGCTGCAAATACCAATCTTCCAGCCCCATCTTTCAGCTTCCAACAGCTACTTTCTAGTTTCCACTCTCATGGACTGAACCTTAAAGACCTTGTAGTCCTCTCTGGTGGCCACACCATTGGTTTTGCCCAATGCAGTGCTTTTTTCAAGGACAGGATCTTCAATGACACCAACATAGACCATAAATTTGCAGCCACTTTGTGTAAAATATGCTCTCGAATTGATTGTAACAATAATTTAGCATCACTTGATTCCACTCCTGCAAGATTTGATACCACATATTATACTTCTTTATTGTACAAAAAGGGTCTTCTTCATTCTGATCAAGAGCTCTTCAAGGATGATGGTAGTGAAAGTGACAAATTGGTGCAGTTTTATAGCAAAAACTCTTATGCTTTTGCTATAGACTTTGGAGTTTCCATGATCAAGATGGGTAACATGAAGCCTCTCACTGGAAATAAGGGAGATATTAGGTGTGATTGCAGAAAAGTCAATTACTGA 984 0.3953 MAASHVQYLVVLVMVHFATLYVIPTHANLTPEYYDKVCPQALPTIRSIVEKAIISEHRIGASLLRLHFHDCFVNGCDASVLLDDTPFFLGEKSALPNRNSLRGFEVVDEIKEAVDKVCKHPVVSCADILAIAARDSVAILGGQTYWYEVLLGRKDARTASRDAANTNLPAPSFSFQQLLSSFHSHGLNLKDLVVLSGGHTIGFAQCSAFFKDRIFNDTNIDHKFAATLCKICSRIDCNNNLASLDSTPARFDTTYYTSLLYKKGLLHSDQELFKDDGSESDKLVQFYSKNSYAFAIDFGVSMIKMGNMKPLTGNKGDIRCDCRKVNY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0328 327 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Lal22g0328 327 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PANTHER CATIONIC PEROXIDASE 10 326 - -
Lal22g0328 327 Gene3D Peroxidase, domain 2 169 305 - -
Lal22g0328 327 PANTHER PEROXIDASE 72-RELATED 10 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 CDD secretory_peroxidase 28 325 IPR033905 GO:0004601|GO:0042744
Lal22g0328 327 Gene3D - 33 326 - -
Lal22g0328 327 SUPERFAMILY Heme-dependent peroxidases 28 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal22g0328 327 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0328 Lal-Chr22 2082437 2085319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0328 21 326 Peroxidase AT5G05340 53.398 3.28e-110 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0328 K00430 - gmx:100810852 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0328 22 2082437 2085319 Lal22g0328 22 2082437 2085319 ECH
Lal18g1272 18 15336881 15339298 Lal22g0328 22 2082437 2085319 LSH
Lal22g0328 22 2082437 2085319 Lal6g0358 6 2276590 2280025 LSH