Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0322 ATGGGAAACAAGTTCAAACTTTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAAATCAAGGAAGAGAAATGGCTCTGATGTTATGAAGAACAAATCAACTTCACCAACAACATCACAAAGGTCACTCCCAAAATATTCACATTATGTCCAAACTGAACCAAGTAGAAGTGGTAAGTTATACAACACACCTATTCACACCAATGACTTGCCACCATTCAATGATTCACAAAGAAGGTCATCAAAGAGAAGGGCTAGGAGAAAAACCATTTACAAGCCTTCTCCAGTTGTGTCCTCTTCTTTCAAAGCTAGTTCTAGCTGTGATTCCAGAAATTGTTGGACTAAGCCATATCAAATTCAGTCTCCAGATTATGATGCCTCTTCCTTTGAAAGTTCTTCTGAATCTGATATCCATGAATATGTTTATTCTGAGTCTGAGTGTGATAGATTTTCTGTTCCTGACTTGCTTAATGGAATAGACTCAAATTGCAGCTGCAGAGTTAGTTCTTCTACTAATGATATCATCATTGACATGAAAAATGAATGCTTCACTGGGAATTCTGAAAAGCTAGATGGATTTGGTACAATTTCACAGTTAGGCCTTGCTTCAATATTGACAAAGCCAGTGAAGTTTGATAAGAAGGACTCTGGAGCCACTGAGTTTGATGTGTTGCAGATGGATCACTCTCTCCCTCACAAATTTACCGAAGAGGAAAGCGGTAGAACTCAGAGAAGGCGAAAAGGCAGCCACATAGCTCGAAAGTCGTCTGCTAATTCTACAGGCGTAAAACTTAGAGTCAATTCTCCAAAACTGGCAAGCAAAAAAATGCAAGCCTATGCAAGAAAGAGTGTGTCATCCAATAGTCCTAGTAAAGCTTTAAGGAATACAAGCTTCCCAGATGGATATGCTGTTGTTCAGTCTTCATTTGATCCACAAAGTGATTTCAAGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGGGCATCGAAAGATTTGGAGGATTTACTTGCCTGCTATCTTTCCCTAAATTCAAGTGAATATCATGATCTCATTGTTAAAGCATTTGAACAAATTTGGTTTGACATGGCTCAACTGAAAATTTAA 1125 0.384 MGNKFKLSDMIPNAWFYKLKDMSKSRKRNGSDVMKNKSTSPTTSQRSLPKYSHYVQTEPSRSGKLYNTPIHTNDLPPFNDSQRRSSKRRARRKTIYKPSPVVSSSFKASSSCDSRNCWTKPYQIQSPDYDASSFESSSESDIHEYVYSESECDRFSVPDLLNGIDSNCSCRVSSSTNDIIIDMKNECFTGNSEKLDGFGTISQLGLASILTKPVKFDKKDSGATEFDVLQMDHSLPHKFTEEESGRTQRRRKGSHIARKSSANSTGVKLRVNSPKLASKKMQAYARKSVSSNSPSKALRNTSFPDGYAVVQSSFDPQSDFKESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDMAQLKI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0322 374 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Lal22g0322 374 MobiDBLite consensus disorder prediction 235 250 - -
Lal22g0322 374 MobiDBLite consensus disorder prediction 26 96 - -
Lal22g0322 374 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
Lal22g0322 374 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Lal22g0322 374 MobiDBLite consensus disorder prediction 235 269 - -
Lal22g0322 374 MobiDBLite consensus disorder prediction 34 80 - -
Lal22g0322 374 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 372 IPR038933 GO:0045892
Lal22g0322 374 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 372 - -
Lal22g0322 374 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 308 369 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0322 Lal-Chr22 2040019 2041143 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal22g0322 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0322 - - gmx:100780926 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0322 22 2040019 2041143 Lal22g0322 22 2040019 2041143 ECH
Lal18g1276 18 15366484 15367623 Lal22g0322 22 2040019 2041143 LSH
Lal3g0436 3 3029722 3030762 Lal22g0322 22 2040019 2041143 PCT
Lal22g0322 22 2040019 2041143 Lal3g0436 3 3029722 3030762 PCT