Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0319 ATGCAAGATCTATCGTCAAACCCTAATTCCAATCCTCTCAAAGCCAATGCCGCTTCACAATTACCGCCACCTCCGCCGTCCACGGCAGCAACATCCTCATCATTTTTTATTCGATCCGCCGGAAGTGGTGGCCCCCACCACCGTAGGGCTCACTCGGAGGTGAGCTACCGGTTGCCGGACGACGTGATGGATCTGTCGCCGTCCGATCCATTCAACGGCGGGTCGGCGGCGGCGAGCTTTGAAGATATCGGATCGGAGGATGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCGGAGTTTCGAACGGGTCGGGTGAATTCGGTAATGGAACGGATCCGGGTGAGAATGGTGAACCGTCGGAGAAGAATCCGAATGTGAGGCCGATGCATCGGCATAGTAGTTCGGTGGATGGTTCAACGTCGTCGTTTGGAGAGATTATGGATGCGAAGAAAGCTATGACTCCTGATAAGTTAGCTGAGCTTTGGACAATTGATCCTAAACGCGCCAAGAGGATACTCGCGAATCGGCAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCTCGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAACTGACACTGTACCAGAGGGACACAACAGGTCTGAGTACTGAAAATGCAGAGCTTAAGTTCCGTCTTCAAGCAATGGAGCAACAAGCACACCTTCGCGATGCTCTTAACGAAGCACTGAAGAAGGAAGTTGAGAGGCTTAAAGTTGCTACTGGGGAGATTATGAGCCCTACTGACTCTTTCAATCTTGGAATGCACCAGATGCCATTTACAGGATCTAATTTCTTTCCAATCCCACCACAATCAGGTCCTTCTGGACAGCAAAACATGCAGTTGCCACCCGTTGGTCATGCCCCATCTAGCATACCAACCCATCAACAGCAACAAACAAATTCTCATTTGCTCTCAGAAAGATTACAAAATGACCAACTTGGTCGTTTTCAAGGACTTGACATTAGTAGCAAAGGATCAGCTCTCGTGAAGTCTGAAGGGTCCTCACTTTCTGCTAGTGAGAGTAGCACTACATTTTGA 1101 0.4932 MQDLSSNPNSNPLKANAASQLPPPPPSTAATSSSFFIRSAGSGGPHHRRAHSEVSYRLPDDVMDLSPSDPFNGGSAAASFEDIGSEDDLFSTYIDVDKLGVSNGSGEFGNGTDPGENGEPSEKNPNVRPMHRHSSSVDGSTSSFGEIMDAKKAMTPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENAELKFRLQAMEQQAHLRDALNEALKKEVERLKVATGEIMSPTDSFNLGMHQMPFTGSNFFPIPPQSGPSGQQNMQLPPVGHAPSSIPTHQQQQTNSHLLSERLQNDQLGRFQGLDISSKGSALVKSEGSSLSASESSTTF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0319 366 CDD bZIP_plant_RF2 169 218 IPR044759 GO:0003700|GO:0006355
Lal22g0319 366 SUPERFAMILY Leucine zipper domain 168 219 IPR046347 GO:0003700|GO:0006355
Lal22g0319 366 MobiDBLite consensus disorder prediction 1 79 - -
Lal22g0319 366 Gene3D - 168 217 - -
Lal22g0319 366 MobiDBLite consensus disorder prediction 348 366 - -
Lal22g0319 366 Coils Coil 243 263 - -
Lal22g0319 366 Pfam bZIP transcription factor 168 221 IPR004827 GO:0003700|GO:0006355
Lal22g0319 366 MobiDBLite consensus disorder prediction 347 366 - -
Lal22g0319 366 MobiDBLite consensus disorder prediction 283 322 - -
Lal22g0319 366 MobiDBLite consensus disorder prediction 104 143 - -
Lal22g0319 366 PANTHER ATBZIP TRANSCRIPTION FACTOR 7 363 - -
Lal22g0319 366 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 363 - -
Lal22g0319 366 Coils Coil 184 211 - -
Lal22g0319 366 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Lal22g0319 366 MobiDBLite consensus disorder prediction 1 17 - -
Lal22g0319 366 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0319 Lal-Chr22 2024852 2028269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0319 24 366 bZIP Transcription Factor Family AT2G40620 52.770 6.82e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal22g0319 bZIP_1 5.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0319 - - vra:106763153 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0319 22 2024852 2028269 Lal22g0319 22 2024852 2028269 ECH
Lal18g1279 18 15387894 15391254 Lal22g0319 22 2024852 2028269 LSH
Lal5g1265 5 15379550 15383587 Lal22g0319 22 2024852 2028269 PCT
Lal3g0441 3 3058907 3062274 Lal22g0319 22 2024852 2028269 PCT
Lal22g0319 22 2024852 2028269 Lal5g1265 5 15379550 15383587 PCT
Lal22g0319 22 2024852 2028269 Lal3g0441 3 3058907 3062274 PCT