Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0294 ATGCCAACAACAGCATCACCTGATCTTTCCCTTCACATAAGCCTTCCAAGCACCTCCACCTCTTGCAATAACACTAATGCTACAACCATTTATGCATCCCTTTCCACCACAACTGTGTCTCAAGCCCACACAGAACTCTCTCTTGGAAGAAATTTCACATCCACACAGGAAACTCCACAAAACCCTTATTACCAAACCCAAACTCATTTCAATCATCTTCATCACAACAATAGTAATTCTACTACTACTACTACTACTACTACTACTACAAGTACTAACACTCCCTTGAATCATATAAACTATGATGTACCATTAGATGGCTTGAGACCAATCAAGGGGATTCCAGTATATCACAACCGTTCATTCCCTTTCTTGCCTATGGACCACTTGAGAGATCAACACAAAGATCAACAACAACATCAGCAACAACAACAACTACAACAAAATATGTGCTTATATCATCATGTACCTTCTTATCCCTCTTTGTCCTCTTCTTGTCCATCGCCTTCGCCCTACTTCACGGGGGCAGGTTTGGATCCCATGTCTCTAAGGGCAGCCACTGCAGCTGCTACAAGGTTTAATGGGATTTGTGGTGGTGATGCTTTCAAATCTCTCCCATCATTGCACCAACATCACTCACAGTTTGGGGGTTCCCCTAACTTAGAGCAATCTTCTGGGATAATGAGATCAAGGTTTTTGCCTAAGCTTCCTATCAAGAGGAGCATGAGAGCACCAAGAATGAGATGGACAAGCTCCCTCCATGCTCGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTTACATTAGCTCATGTGAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTATTGCTTCTTCAGGGCATTCAGATGGATCTGGAGAGGATGACATGTCTCCAATAGGCAGCAGTGTCGATCGAGGCGGTCTAAGTCAATTTCCCGACCAAAGAGGGCTGCCGGATCAGCCAGTTCAGCAAGATATGGATTACACTTCCACCACTCCTACTCTATGGAGTAACTCGTCAAGTTATAGAGAGCCATGGCAATCTACTCCTAAAGAGATAGATGGTATCAGGCCGCAAAATCTCCGGTCACAAACAAGACCCAGAGTTCTCCAAAATCAGGAATGTGATTCAACCCACATCAGAAGCACTTTGGGAGGTTCTAATTTGGAGTGCAAGATTAACCCAAGCTTGGAGTTCACGTTAGGTAGACCAGATTGGAATGGCAAACAAAAGTCCCAATTTTGA 1317 0.4396 MPTTASPDLSLHISLPSTSTSCNNTNATTIYASLSTTTVSQAHTELSLGRNFTSTQETPQNPYYQTQTHFNHLHHNNSNSTTTTTTTTTTSTNTPLNHINYDVPLDGLRPIKGIPVYHNRSFPFLPMDHLRDQHKDQQQHQQQQQLQQNMCLYHHVPSYPSLSSSCPSPSPYFTGAGLDPMSLRAATAAATRFNGICGGDAFKSLPSLHQHHSQFGGSPNLEQSSGIMRSRFLPKLPIKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPIASSGHSDGSGEDDMSPIGSSVDRGGLSQFPDQRGLPDQPVQQDMDYTSTTPTLWSNSSSYREPWQSTPKEIDGIRPQNLRSQTRPRVLQNQECDSTHIRSTLGGSNLECKINPSLEFTLGRPDWNGKQKSQF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0294 438 MobiDBLite consensus disorder prediction 72 93 - -
Lal22g0294 438 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 5 434 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal22g0294 438 SUPERFAMILY Homeodomain-like 242 298 IPR009057 -
Lal22g0294 438 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 245 298 IPR006447 GO:0003677
Lal22g0294 438 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 5 434 - -
Lal22g0294 438 MobiDBLite consensus disorder prediction 300 392 - -
Lal22g0294 438 MobiDBLite consensus disorder prediction 347 371 - -
Lal22g0294 438 Gene3D - 244 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0294 Lal-Chr22 1858364 1864015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0294 7 433 G2-like Transcription Factor Family AT5G16560 41.611 1.67e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal22g0294 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0294 - - lang:109359351 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0294 22 1858364 1864015 Lal6g0320 6 2047733 2052949 LSH
Lal3g0510 3 3710986 3717067 Lal22g0294 22 1858364 1864015 PCT
Lal5g1215 5 14880948 14886814 Lal22g0294 22 1858364 1864015 PCT
Lal22g0294 22 1858364 1864015 Lal3g0510 3 3710986 3717067 PCT
Lal22g0294 22 1858364 1864015 Lal5g1215 5 14880948 14886814 PCT