Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0292 ATGGACATGACAGCCCGGTCTTTGAGGGACGTGGGTCCCGCCTGCATGTGCGTTCCCTCCTCTTCCATTGTCACCTTCACTCTCTTCTATGCACACCACTCTTTCCACCATTCTCATTACTCTCACCTCTCTCTCTCTCACACACACACCATGGAGAAGTTCAAGTTCGAACCTTTTCTCATTTTCCTATCTGGGTTCCTCTCTTTCACTGTTTTAGTTTTCTCTCAAAACGACGACGCTTCAGTAATGCTATTTCTTAAGAAAAACCTCATCCCACCCGAATCTCTCGGATGGACCGACCCGAACCCATGCAAGTGGAGCCACGTCACTTGCTCCGGCGACAACCGTGTAACCCGGATCCAAATCGGGCGCATGAACCTTCAAGGCTCTCTCCCACCCACTCTCCAAAACTTGACCCAGTTGCAGCACCTTGAGCTCCAATACAACAACTTTTCGGGACCCATACCCGACTTAAACGGGTTAACCTTGCTCCAAGTCTTCATGGCCAGCAACAACCGCTTCACTTCATTCTCAACCAACTTCTTCAACGGCATGTCTCAGCTTCAAGTTGTGGAAATCGATAACAACCCTTTTCAGGAGTGGGAGATACCTTTGACTCTTCAAAACGCTTCTTCACTTCAGAACTTCTCTGCTAACTCTGCTAATGTTAGAGGCAAGTTACCCGATTTCTTTGGCCCTGATGTGTTCCCGGCTTTGACCCATTTGCATTTAGCATTTAACAAAATTGAAGGAACTTTGCCTTTGAGTTTTTCTGGCTCACAGATTGAGACCCTTTGGTTGAATGGACAAAGGAGTGATGGTGATGCTAAACTTGGTGGCACTGTTGAGGTTTTGCAGAACATGACTTTTTTGACTGAGGTTTGGTTGCACTCAAATGGTTTCACTGGCCCTTTACCAGATTTTTCAGGGTTGAAAAGCTTAAAAGCTTTGAGCTTGAGGGATAATAGTTTCACTGGTCCTGTTCCGAGTTCGTTGGTGAGTCTTAAGTCTTTGAAAGTTGTTAACTTGACTAACAACTTTCTTCAGGGACCAATGCCTGTGTTTGGTCCTGATATTGAGGTTGATATGAGTAAGGATTCAAATAGCTTTTGCTTGCCTGGTCCTGGTGATTGTGATCCCAAGGTGCAGGATTTACTTTCTATTGTGAGACTTTTTGGTTATCCTCAAAGGTTTGCTGAGAATTGGAAGGGGAATGATCCTTGTAATGATTGGCTTGGGATTACTTGTAGTAATGGGAACATTACTGTTGTCAATTTTCAGAAGATGGGGCTTACTGGTGTGATATCGCCGGATTTTGCCAAGCTCAAATCACTGCAAAGACTTGTGCTGGCTGATAACAATCTTACCGGCTTAATTCCTGAAGAACTTACTAGTTTGCCTGTGCTTACTCAATTGAATGTCGCAAACAATCAGCTTTTTGGGAAAAAACCAAGTTTTAGGAGTAACGTGATTGTTGACAGTAGTGGCAACAAGGATATAGGGAAGGATAAAATCAGTTTGTCCCCTCAGGGCTCAGTGCCTCCAACAATTCCAAGTGGAAGAGGAGAAAATAATGGGAGTTCTGGAAATGGTGGCAAAAAGTCTTCTTCCCATGTAGGAGTGATTGTGTTTGCTGTGGTTGGGTCTGTATTTGTGGTTTGCTTGATTGGTTTCTTAGTTTTCTGCTTGCTTAGGATGAAGCAGAATAGGTTAAGCAGGGTCCAAAGCCCAAATACACTAGTTATTCACCCTCACCATTCTGGTTCGGATAATGAGAGTGTGAAGATTGCAGTTGCAGGTTCAAGTGTCAGTGTTGGTGGTGTTAGTGAAACTCAAACCATGGGTGGCAGTGAGGCAGGAGATATTCAAATGGTTGAAGCAGGAAATATGGTCATTTCCATACAAGTCCTGAGGAATGTGACGGACAATTTCAGTGAGAAGAATATATTGGGACAAGGAGGTTTTGGAACTGTTTATAAAGGTGAACTGCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGCATAATAACCGGCAAGGGTGCTACAGAATTCAAGTCTGAAATAGCTGTTTTGACGAAGGTTCGTCATCGACATCTTGTTGCTCTTCTTGGCTATTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGAACGCTAAGCAGACATCTTTTTAACTGGTCAGAAGAAGGGCTGAAACCATTGGAATGGAATAGAAGATTGACCATTGCCTTGGATGTAGCAAGGGGTGTTGAATATCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAATATTCTCCTTGGAGATGATATGAGGGCAAAAGTTGCAGATTTTGGTTTAGTGCGCCTTGCTCCAGAAGGCAAAGCTTCCATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACGACTAAAGTTGATGTGTTCAGCTTTGGTGTAATTTTGATGGAAGTGATAACAGGAAGAAAAGCACTTGATGAGACCCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGTCGAATGTACATAAACAAGGACTCATTCCGCAAGGCCATTGATCCCACACTTGATCTGAACGAGGAAACACTTGCTAGCGTTCACACCGTAGCTGAGTTAGCTGGTCACTGTTGTGCTAGGGAACCATATCAAAGACCTGACATGGGTCATGCTGTTAATGTGCTTTGTTCTCTTGTAGAACTTTGGAAACCATCGGATCAGAGTTCGGAAGATATGTACGGTATTGACCTTGACATGTCTTTACCACAAGCACTTAAGAAGTGGCAAGCTTATGAAGGTGGAAGTTCTTCATCTTCACTTCTTCCAAGCTTGGATAACACACAGACAAGTATACCTACCTGCCCATATGGATTTGCCAATTCTTTCACATCTGCAGATGGTAGATAA 2982 0.4383 MDMTARSLRDVGPACMCVPSSSIVTFTLFYAHHSFHHSHYSHLSLSHTHTMEKFKFEPFLIFLSGFLSFTVLVFSQNDDASVMLFLKKNLIPPESLGWTDPNPCKWSHVTCSGDNRVTRIQIGRMNLQGSLPPTLQNLTQLQHLELQYNNFSGPIPDLNGLTLLQVFMASNNRFTSFSTNFFNGMSQLQVVEIDNNPFQEWEIPLTLQNASSLQNFSANSANVRGKLPDFFGPDVFPALTHLHLAFNKIEGTLPLSFSGSQIETLWLNGQRSDGDAKLGGTVEVLQNMTFLTEVWLHSNGFTGPLPDFSGLKSLKALSLRDNSFTGPVPSSLVSLKSLKVVNLTNNFLQGPMPVFGPDIEVDMSKDSNSFCLPGPGDCDPKVQDLLSIVRLFGYPQRFAENWKGNDPCNDWLGITCSNGNITVVNFQKMGLTGVISPDFAKLKSLQRLVLADNNLTGLIPEELTSLPVLTQLNVANNQLFGKKPSFRSNVIVDSSGNKDIGKDKISLSPQGSVPPTIPSGRGENNGSSGNGGKKSSSHVGVIVFAVVGSVFVVCLIGFLVFCLLRMKQNRLSRVQSPNTLVIHPHHSGSDNESVKIAVAGSSVSVGGVSETQTMGGSEAGDIQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECGIITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWSEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMEVITGRKALDETQPEDSMHLVTWFRRMYINKDSFRKAIDPTLDLNEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLCSLVELWKPSDQSSEDMYGIDLDMSLPQALKKWQAYEGGSSSSSLLPSLDNTQTSIPTCPYGFANSFTSADGR 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0292 993 SUPERFAMILY Protein kinase-like (PK-like) 622 928 IPR011009 -
Lal22g0292 993 Pfam Leucine rich repeat 435 479 IPR001611 GO:0005515
Lal22g0292 993 SUPERFAMILY L domain-like 94 486 - -
Lal22g0292 993 Pfam Protein kinase domain 645 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0292 993 SMART LRR_typ_2 236 259 IPR003591 -
Lal22g0292 993 SMART LRR_typ_2 442 465 IPR003591 -
Lal22g0292 993 SMART LRR_typ_2 161 184 IPR003591 -
Lal22g0292 993 SMART LRR_typ_2 466 488 IPR003591 -
Lal22g0292 993 Gene3D Transferase(Phosphotransferase) domain 1 722 943 - -
Lal22g0292 993 MobiDBLite consensus disorder prediction 509 533 - -
Lal22g0292 993 Pfam Leucine rich repeat N-terminal domain 385 417 IPR013210 -
Lal22g0292 993 Pfam Leucine rich repeat N-terminal domain 77 112 IPR013210 -
Lal22g0292 993 CDD STKc_IRAK 650 923 - -
Lal22g0292 993 PANTHER RECEPTOR PROTEIN KINASE TMK1 63 993 - -
Lal22g0292 993 Gene3D Phosphorylase Kinase; domain 1 605 721 - -
Lal22g0292 993 Gene3D Ribonuclease Inhibitor 75 378 IPR032675 -
Lal22g0292 993 ProSitePatterns Protein kinases ATP-binding region signature. 650 672 IPR017441 GO:0005524
Lal22g0292 993 PANTHER OSJNBA0070M12.3 PROTEIN 63 993 - -
Lal22g0292 993 ProSiteProfiles Protein kinase domain profile. 644 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0292 993 SMART serkin_6 644 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0292 993 Gene3D Ribonuclease Inhibitor 380 504 IPR032675 -
Lal22g0292 993 MobiDBLite consensus disorder prediction 501 533 - -
Lal22g0292 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0292 Lal-Chr22 1848324 1852208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0292 126 926 Receptor kinase-like Gene Family AT5G07280 30.377 2.87e-80 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal22g0292 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0292 - K00924 aprc:113846741 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0292 22 1848324 1852208 Lal22g0292 22 1848324 1852208 ECH
Lal22g0292 22 1848324 1852208 Lal6g0316 6 2030097 2034228 LSH