Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0290 ATGTTCCTCTTTGACACCACGCACATTGCTTCTTCTCTGCAAGATATGGATGCACACTTGCCTCTATTATATAATGGTGTTTATCATCCAATTGCACTCTTTTTTTCTCATGGACTAATGCCACTGCTGATCAAACACCTGTTACCACAGCCCGAAAATAAGGGGGGATCGTCTGATCAGAAAGCAAGCCTCACACCAGAACGATTTCTCAGGTTGTTACTTAGTGACCATGAGGTCACATGTTCAAATACTGGAAGCAACCTCCTTGCTTGGGGTAAGGCTGCGTACATCCACCCCTCCTCAGACCACACTAAGTGGGAGTCTCGTGCATTGGGCCATTCTTTTACTATAATAAATCCAATTGAATTTGGGACTGTTCGATATACATCTTTCCTTTTGAAATTTAAGCCTAATATTCATTTTAATTTGCAAGATGGAAATGAAGAGTGCAACTTCCTCCAACAAAGTGAACAAGGCAAGACTAAAAAGCAACAAAGTGGGATGAGTATATCGATGCATCAAAGACTAAGTGATGAGCAAGTGGACCAACATATAGTCCCCAAGCCAAGGTGGCTCGAAGTTTTTCTAAAAGAATCTTTCTTTGGCTCCTGTAAAGCTCATCGACGGAAAAGGAATGAGTTAAATAGATACTGTATAAACTGCAATGTGTCAGCATGCGGACATTGTGTATCGTCAGATCGCCATGTCGATCACAAGATACTTAAAGTCCATAGATATGTTTACAAAGATGTTGTTTCTCTTAGTGCTATGGAAGAGCATATTGACTGCTCAGAAATTCAGCCCTATAAATGCAACAAACAATTGGTTATTTCACCAAATCCTCTGCCATACTCTGGTCCGGCACAATTAGATGATGAGGAAACATGCAACATCTGCAGTAGAAAGTTGACTGAACCCGATTTATATCGCTATTGTTCCATTTCATGCAAGGTCAAAGCTGTTCAACGAAAGGCCGATGATTCTGCTCCTCCCTTCATTCTCATCCAGAGTCCTGAGGAAATACAGGAGGAAACCTCTAAGTCCCAAAATGAGAGAACTTCTGAACCCCAACCTGAGGAAACTTCTGAACCTCAATCTCTGAGGAAAAGAAAAAGAAAGGGAATACCTCACAGAGCTCCCTTCTTCTAA 1149 0.4143 MFLFDTTHIASSLQDMDAHLPLLYNGVYHPIALFFSHGLMPLLIKHLLPQPENKGGSSDQKASLTPERFLRLLLSDHEVTCSNTGSNLLAWGKAAYIHPSSDHTKWESRALGHSFTIINPIEFGTVRYTSFLLKFKPNIHFNLQDGNEECNFLQQSEQGKTKKQQSGMSISMHQRLSDEQVDQHIVPKPRWLEVFLKESFFGSCKAHRRKRNELNRYCINCNVSACGHCVSSDRHVDHKILKVHRYVYKDVVSLSAMEEHIDCSEIQPYKCNKQLVISPNPLPYSGPAQLDDEETCNICSRKLTEPDLYRYCSISCKVKAVQRKADDSAPPFILIQSPEEIQEETSKSQNERTSEPQPEETSEPQSLRKRKRKGIPHRAPFF 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0290 382 MobiDBLite consensus disorder prediction 155 180 - -
Lal22g0290 382 MobiDBLite consensus disorder prediction 344 369 - -
Lal22g0290 382 ProSiteProfiles Zinc finger B-box type profile. 204 243 IPR000315 GO:0008270
Lal22g0290 382 MobiDBLite consensus disorder prediction 329 382 - -
Lal22g0290 382 SUPERFAMILY B-box zinc-binding domain 203 248 - -
Lal22g0290 382 CDD Bbox2 204 243 - -
Lal22g0290 382 MobiDBLite consensus disorder prediction 155 176 - -
Lal22g0290 382 Pfam PLATZ transcription factor 245 318 IPR006734 -
Lal22g0290 382 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 171 382 - -
Lal22g0290 382 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 171 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0290 Lal-Chr22 1839791 1844385 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal22g0290 PLATZ 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0290 - - lang:109355923 399.823