Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0289 ATGCATCATTCATGTGAATTCAGTCCTGCAACAATCATATCATCAGAATCTCATTCACTGGTGTTACCTCTAAAGCATCCTCTTTGTTCTGAAGCATCATTGTCCACAGTTTCTGTTCATGATGAACATGTGGAGCAATCTAAAGACAACAAGCTATGGTGGCTTCTTGATTTTCTTGGAGAAACTTTCTTCAACTCATGTGAAGCTCACCCATGTGGGAGGAACGAATTAAATCATTACTGTTTATCTTGTAATAAATCTGCTTGCAAATTTTGTATATCCTCAGGTGTTCATCACCATCACCAGATACTGAAAATCCATAGGTATAATCACATAGATGTTGTCTACCTCATTAATATGAGAGAGTTTATCAACTGCTCAGAAATTCAGCCCTACAAATCGAAAAGGAAAATGGTTATTTCTCTGAATCCTTTGCCACAGAATAGGTCAGGATTAAATGATGAGGGATCATGCAAAATATGCAGTAGAAAATTGAACCAACCTAATAAATATCACTACTGTTCGATTTCATGCAAGGTGAAAGCAGTTTTAGAGAAGCGTGATGATTCATTCCTTCCGTTCATTTGCATTAAGAGTCATTCCATAGAGGAAACTTGTAAACTGCAATCTCTTCGGAAAAGAAGAAGAAAGACAACACCCCATAGAGCTCCCTTCTTCTAA 681 0.3715 MHHSCEFSPATIISSESHSLVLPLKHPLCSEASLSTVSVHDEHVEQSKDNKLWWLLDFLGETFFNSCEAHPCGRNELNHYCLSCNKSACKFCISSGVHHHHQILKIHRYNHIDVVYLINMREFINCSEIQPYKSKRKMVISLNPLPQNRSGLNDEGSCKICSRKLNQPNKYHYCSISCKVKAVLEKRDDSFLPFICIKSHSIEETCKLQSLRKRRRKTTPHRAPFF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0289 226 SUPERFAMILY B-box zinc-binding domain 65 111 - -
Lal22g0289 226 CDD Bbox2 67 106 - -
Lal22g0289 226 ProSiteProfiles Zinc finger B-box type profile. 67 106 IPR000315 GO:0008270
Lal22g0289 226 Pfam PLATZ transcription factor 108 180 IPR006734 -
Lal22g0289 226 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 39 226 - -
Lal22g0289 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 39 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0289 Lal-Chr22 1837454 1838573 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lal22g0289 PLATZ 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0289 - - lang:109356337 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0289 22 1837454 1838573 Lal6g0313 6 2012426 2021537 LSH