Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0287 ATGACAGAGAAGGAGAGGGAGAAGGAGAGGGAGGAGGAGAGGGAGGAGGAAGGGGTGCTTGAAACGTCGTCGTTGGATGAGAGAGAGTACGAGATTCAGGAACTGAGGGAGCGGTTGAAATCTTCAAGAGTGAGTCGATTCAATTTGATAGAGAATGAGTTGAGTTGGCGAAAAAAGTTCAGTCGCGAATCCCTTCTTGCTGGAATCAAAGACTTCGTTATCCTTCCTCATCACTGGTGGTATAGGGCATGGTCAACATTCATATTGTTATGGGCAGTGTACTCATCCTTCTTCACTCCAATGGAGTTTGGATTTTTTCGTGGCCTTCCTCAACATCTCTTTCTATTGGACTTCATTGGACAAATAGCTTTTCTTGTTGACATTGTTTTGCAGTTCTTTGTTGCTTATAGAGACAGTCAGACATATCGTATGGTCTACAAGCGAACCCCTATTGCTCTCAGGTATCTAAAATCTAGCTTTGTGTTTGATTTACTAGGATGTATGCCTTGGGACATCATCTACAAGGCTTGTGGAAGAAAAGAGGAAGTGAGATACCTTTTATGGATTAGACTATATCGGGTGCGGAAAGTCCATGATTTTTTATACAAGTTGGAGAAAGATATTCGTATCAATTACATTATAACTCGAATTATTAAACTTATAGTAGTTGAACTTTACTGCACCCACACAGCAGCATGCATTTTCTACTATTTGGCTACTACACTACCTGAATCCCAAGAGGGGTACACATGGATTGGAAGTTTAAAAATGGGTGATTTTAGTTATTCACATTTCAGAGAAATTGATCTTGGGAAGCGCTACATAACATCCTTGTATTTTGCTATTGTTACTATGGCTACTGTCGGCTATGGAGATATACATGCAGTAAATATGAGGGAGATGTTATTTGTAATGATATATGTTTCATTTGATATGGTTCTTGGTGCTTATTTGATTGGTAACATGACAGCTTTGATAGTAAAGGGATCAAAGACTGAAAAGTTTAGGGATAAGATGACAGATCTTATGAAATATATGAACAGAAATAGACTTGGAAGGGATATTTGTGAACAAATAAAAGGCCATTTTCGCTTACAGTATGAGAGTAGCTATACTAACGCTGCTGCCATTCAGGAAATCCCCATTTCTATTCGATCTAAGATATCTCAAACATTATATTTGCCATACATTGAAAAAGTTCCACTTTTTAGGGGCTGCTCTTCAGAATTCATCAGTCAGATTATTATTAGGCTCCATGAGGAGTTCTTTCTTCCCGGGGAAGTTATCTTGGAACAAGGAAATGTTGTAGATCAACTATATTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCACAGCTGAAGATGGATCTGAAGAAACCGTTTCATTTCTTCGACGCAACAGCTCATTTGGGGAAATATCTATTCTTTGCAACATTCCTCAGCCATATACTGTTCGCGTTTGTGAACTGTGTAGGCTTGTGCGTCTTGATAAACAATCATTTACAAATGTCCTAGATATATACTTTTATGATGGGAGGAAAGTACTAAACAACCTTCTAGAGGGAAAAGAGTCTTTTCGAGGTAAGCAATTGGAGTCAGACATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGGATCTGTATCAGCTAAAAGGTCTGATTCGAGCCGGAGCTGATCCAAACAAGACAGATTATGATCGAAGGTCACCTTTGCATCTTGCAGCATCTAGAGGATATGAAGATATCACACTTTTCCTTATTCAAGAAGGTGTAGACATCAATCTTAGAGATAACTTCGGAAACACACCCTTGCTTGAAGCAGTTAAGAATGGACATGACCGGGTTGCTTCTTTACTTGTTAGAGAAGGGGCTTCTATGAATTTAGAAAATGCTAGTAGTTTTCTATGTACCGCCGTTGCAAGGGGAGATTCAGATTATCTTAAAAGGCTTTTATCTAATGGCATGGATCCTAACTTGAAAGATTATGATTACCGAAGCCCTCTTCACATTGCTGCAGCTGAAGGTTTATGCTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTAGCGTTTTTGCCAAAGACAGAACCAAAACTTTTATTCATGTCACTGCAAACAGATGGGGAAATACCCCGCTTGATGAAGCCCGAATGAGCGGAAATAAGAATCTGATCAAGCTACTTGAAGATGCAAAATCTGCCCAGTTGACAGAATTCCCATGCCGTTCCGAAGAATTTACAGATAAAATGCACCCAAAGAAATGCACAGTGTTCCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGACATGGAATTGTATTATGGATTCCACACACAATTGAAGAACTAATCAAAACATCAGCAGAGCAGATGGAATTACCCAGTGATTCTTGTATTTTATCAGAAGATGCTGGTAAAATTACTGATGTAGACATGATTAAAGATGGTCAGAAGCTGTATTTGGTTCATGAAACACATTAG 2517 0.3937 MTEKEREKEREEEREEEGVLETSSLDEREYEIQELRERLKSSRVSRFNLIENELSWRKKFSRESLLAGIKDFVILPHHWWYRAWSTFILLWAVYSSFFTPMEFGFFRGLPQHLFLLDFIGQIAFLVDIVLQFFVAYRDSQTYRMVYKRTPIALRYLKSSFVFDLLGCMPWDIIYKACGRKEEVRYLLWIRLYRVRKVHDFLYKLEKDIRINYIITRIIKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKMGDFSYSHFREIDLGKRYITSLYFAIVTMATVGYGDIHAVNMREMLFVMIYVSFDMVLGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDICEQIKGHFRLQYESSYTNAAAIQEIPISIRSKISQTLYLPYIEKVPLFRGCSSEFISQIIIRLHEEFFLPGEVILEQGNVVDQLYFVCHGVLEEVGTAEDGSEETVSFLRRNSSFGEISILCNIPQPYTVRVCELCRLVRLDKQSFTNVLDIYFYDGRKVLNNLLEGKESFRGKQLESDITFHIGKQEAELALKVNSAAFHGDLYQLKGLIRAGADPNKTDYDRRSPLHLAASRGYEDITLFLIQEGVDINLRDNFGNTPLLEAVKNGHDRVASLLVREGASMNLENASSFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLCFMAKLLLEAGASVFAKDRTKTFIHVTANRWGNTPLDEARMSGNKNLIKLLEDAKSAQLTEFPCRSEEFTDKMHPKKCTVFPFHPWDPKEHRRHGIVLWIPHTIEELIKTSAEQMELPSDSCILSEDAGKITDVDMIKDGQKLYLVHETH 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0287 838 PRINTS EAG/ELK/ERG potassium channel family signature 117 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal22g0287 838 PRINTS EAG/ELK/ERG potassium channel family signature 226 236 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal22g0287 838 PRINTS EAG/ELK/ERG potassium channel family signature 274 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal22g0287 838 PRINTS EAG/ELK/ERG potassium channel family signature 318 327 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lal22g0287 838 SUPERFAMILY Ankyrin repeat 552 742 IPR036770 -
Lal22g0287 838 PANTHER POTASSIUM CHANNEL SKOR-LIKE 13 837 - -
Lal22g0287 838 Pfam Cyclic nucleotide-binding domain 422 506 IPR000595 -
Lal22g0287 838 Pfam KHA, dimerisation domain of potassium ion channel 764 833 IPR021789 -
Lal22g0287 838 ProSiteProfiles Ankyrin repeat region circular profile. 578 610 - -
Lal22g0287 838 Gene3D - 535 644 IPR036770 -
Lal22g0287 838 ProSiteProfiles cAMP/cGMP binding motif profile. 402 522 IPR000595 -
Lal22g0287 838 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
Lal22g0287 838 SUPERFAMILY cAMP-binding domain-like 330 519 IPR018490 -
Lal22g0287 838 CDD CAP_ED 402 516 IPR000595 -
Lal22g0287 838 SMART ANK_2a 578 607 IPR002110 GO:0005515
Lal22g0287 838 SMART ANK_2a 719 749 IPR002110 GO:0005515
Lal22g0287 838 SMART ANK_2a 642 671 IPR002110 GO:0005515
Lal22g0287 838 SMART ANK_2a 611 640 IPR002110 GO:0005515
Lal22g0287 838 SMART ANK_2a 675 704 IPR002110 GO:0005515
Lal22g0287 838 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Lal22g0287 838 MobiDBLite consensus disorder prediction 1 25 - -
Lal22g0287 838 ProSiteProfiles Ankyrin repeat profile. 642 674 IPR002110 GO:0005515
Lal22g0287 838 SUPERFAMILY Voltage-gated potassium channels 76 327 - -
Lal22g0287 838 Gene3D - 82 328 - -
Lal22g0287 838 ProSiteProfiles KHA domain profile. 765 838 IPR021789 -
Lal22g0287 838 Pfam Ankyrin repeats (3 copies) 648 740 IPR002110 GO:0005515
Lal22g0287 838 Pfam Ankyrin repeats (3 copies) 553 641 IPR002110 GO:0005515
Lal22g0287 838 Gene3D - 645 749 IPR036770 -
Lal22g0287 838 ProSiteProfiles Ankyrin repeat region circular profile. 611 642 - -
Lal22g0287 838 ProSiteProfiles Ankyrin repeat profile. 675 707 IPR002110 GO:0005515
Lal22g0287 838 PANTHER POTASSIUM CHANNEL AKT1 13 837 IPR045319 GO:0005249|GO:0006813
Lal22g0287 838 SMART cnmp_10 402 520 IPR000595 -
Lal22g0287 838 Pfam Ion transport protein 82 327 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lal22g0287 838 ProSiteProfiles Ankyrin repeat region circular profile. 675 707 - -
Lal22g0287 838 Gene3D Jelly Rolls 360 529 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0287 Lal-Chr22 1823282 1832139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0287 72 707 Ion Channels AT5G37500 71.320 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0287 K21867 - gmx:100814385 1431.77