Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0273 ATGGCAATTGGGTTCATGGAAGTGTTGCTGGTGAAAGCAAAGGGGCTTCACGAAACTGATATCTTTGCTCGTATGGATCCGTATGTTCTGTTACAATACAAAGGCCAAGAGCGCAAAAGCAGTGTACTATGTGAGGGTGGCAATAATCCTGTATGGAATGAGAAAATTATATTCAGAGTGGAATACCCTGGCTCAGGTGACCCATACAAGCTCTACCTTAAAATCATGGACAGAGATGTCTTTTCTGCTGATGATTTTGTTGGCCAAGCCACAATCTATGTGAAGGATTTATTGGCAGAAGGAGCAGAGAAAGGATCAGCTGAACTTCATCCTTGCAAGTATAGTGTGGTTGCAGCTAACCAATCTTATTGTGGTGAAATTGAAATTGGTATAACTTTCACTCGAAAGGAAGAGGAATATGGTGACCATGACATTGGAGGGTGGAAGGAAAGTGAGTATTAG 462 0.4199 MAIGFMEVLLVKAKGLHETDIFARMDPYVLLQYKGQERKSSVLCEGGNNPVWNEKIIFRVEYPGSGDPYKLYLKIMDRDVFSADDFVGQATIYVKDLLAEGAEKGSAELHPCKYSVVAANQSYCGEIEIGITFTRKEEEYGDHDIGGWKESEY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0273 153 Gene3D C2 domain 2 135 IPR035892 -
Lal22g0273 153 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Lal22g0273 153 SMART C2_3c 5 106 IPR000008 -
Lal22g0273 153 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Lal22g0273 153 Pfam C2 domain 7 105 IPR000008 -
Lal22g0273 153 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Lal22g0273 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0273 Lal-Chr22 1745645 1747122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0273 3 109 C2H2 Transcription Factor Family AT4G21160 33.333 1.30e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0273 - - gmx:100500493 263.848