Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0272 ATGGCAATTGGGTTCATGGAGGTGCAGCTTGTCAAAGCAAAGGGCCTATATGACACTGATAAGTTTGGTAGAATGGACCCCTATGTTCTGATACAATACAAAGGCCAAGAGAAGAGGAGCATTGTTGCTAAGGGCCAAGGCAGAAATCCAGTATGGAATGAGAAATTTTTGTTCAAAGTAGAATACCCTGGATTGGATAATAGATACAAGGTCATCCTCAAAATCATGGACAAAGATAGCTTATCTGCAGATGACTTTGTTGGACAAGCCATAATCTATGTAGAGGATTTATTGGCTCAAGGGGTAGAAAGTGGAGGAGCTAAACTACAGACTCTAAAGTATAGAGTGGTTCGTGAAAACCAATCTTATTGTGGCGAAATTGATGTTGGTATAACCTTCACCCCAAAGGTGGAAGAGGAATTTGTTGGAGAAGACATTGGAGGATGGAAGGAAAGTGGCATATGA 465 0.4108 MAIGFMEVQLVKAKGLYDTDKFGRMDPYVLIQYKGQEKRSIVAKGQGRNPVWNEKFLFKVEYPGLDNRYKVILKIMDKDSLSADDFVGQAIIYVEDLLAQGVESGGAKLQTLKYRVVRENQSYCGEIDVGITFTPKVEEEFVGEDIGGWKESGI 154
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0272 154 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lal22g0272 154 PANTHER C2 DOMAIN-CONTAINING 1 153 - -
Lal22g0272 154 SMART C2_3c 5 106 IPR000008 -
Lal22g0272 154 Gene3D C2 domain 2 136 IPR035892 -
Lal22g0272 154 Pfam C2 domain 6 103 IPR000008 -
Lal22g0272 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Lal22g0272 154 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 153 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal22g0272 Lal-Chr22 1742299 1744090 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0272 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 5.50e-11 57.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0272 - - gmx:100791344 252.677
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0272 22 1742299 1744090 Lal22g0272 22 1742299 1744090 ECH
Lal22g0272 22 1742299 1744090 Lal6g0283 6 1857452 1858906 LSH