Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0266 ATGGCTTCAAACTCCCTCAATAATAACAAAGAAAGTTCTTCCTCTTGGACATCCATGCAAAACAAGCAATTTGAAAAAGCACTAGCTTTGTATGACAAAGATACTCCAGATCGATGGAAAAACATAGCCAAAGTAGTTGGTGATAAATCAGCTGAGGAAGTGAAGAAACACTATGAAGTCCTTTTGGAGGACCTTAGGCGTATAGAATCTGGAAGTGTTCCAATTCCCAACTATAAGTCCACAGCAAGCAGCAATAATATTATTGATGAAGAAAATAGGCTTCTCAAGTACCTTAATCAGAAGCTTTGA 309 0.3754 MASNSLNNNKESSSSWTSMQNKQFEKALALYDKDTPDRWKNIAKVVGDKSAEEVKKHYEVLLEDLRRIESGSVPIPNYKSTASSNNIIDEENRLLKYLNQKL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0266 102 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Lal22g0266 102 CDD SANT 15 62 IPR001005 -
Lal22g0266 102 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lal22g0266 102 SUPERFAMILY Homeodomain-like 15 69 IPR009057 -
Lal22g0266 102 Gene3D - 7 75 - -
Lal22g0266 102 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lal22g0266 102 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
Lal22g0266 102 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Lal22g0266 102 SMART sant 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0266 Lal-Chr22 1676389 1678611 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal22g0266 Myb_DNA-binding 6.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0266 - - pvu:PHAVU_008G192200g 149.828