Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0264 ATGTACAAGTCTTACAATAAATTTAGGACCGGCAAAAAAACTTGGGACAATAAGATAATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGCGAAAATGCACTAGTGATTGTGTATTTTCACCTTACTTCTCCTATGACGAAGCTACAATCCATTTTTCAGCAGTGCATAAGGTTTATGGTGCTAGTAACGTATCCAGGCTACTTTTACATCTTCCTATCCAATTTAGAAGTGATGCAGCCATCACCATATCTTACCAAGCAATGTCTCGCATGCAGGATCCTATATATGGTTGTGTTGCTCATATTTATGCATTGCAGCAACAGGTTGCCAACTTGCAAGAGGAGATAAATATTCTTGCAAGTAGTCTAATAATGGCAAATTCCACAGTTGGTGTTCTCAATTGTGGCAGTGTTCAAGCACCAGTGAACTCAAACAATGAAATGCACTATATTTTGCAGAATGATGCTAATAGGGCACAGTATTATCAAAATCAAGTGGCTAATGTTCTTTCTCATGAAGGAAGCAGTGCTACAATCTACCACCAAAGTTTTGACTCAATGTTGAATATAGAGCTTTCTAATGCACATGGAGTGGAAGAGTCTTCTCTATTTAGCGATTCCAACTCCAATCCGTTAGAGAAGTTCCTATCTGGAATTGACCAAGAGGTCTTCATGAATCATCCATGGTTCAAGCATAATGCAGAAATGAACTAG 726 0.3898 MYKSYNKFRTGKKTWDNKIMTGFGSSCGACKFLRRKCTSDCVFSPYFSYDEATIHFSAVHKVYGASNVSRLLLHLPIQFRSDAAITISYQAMSRMQDPIYGCVAHIYALQQQVANLQEEINILASSLIMANSTVGVLNCGSVQAPVNSNNEMHYILQNDANRAQYYQNQVANVLSHEGSSATIYHQSFDSMLNIELSNAHGVEESSLFSDSNSNPLEKFLSGIDQEVFMNHPWFKHNAEMN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0264 241 Pfam Lateral organ boundaries (LOB) domain 26 123 IPR004883 -
Lal22g0264 241 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 20 239 - -
Lal22g0264 241 PANTHER LOB DOMAIN CONTAINING PROTEIN 20 239 - -
Lal22g0264 241 Coils Coil 106 126 - -
Lal22g0264 241 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0264 Lal-Chr22 1669366 1670680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0264 20 127 AS2 family AT5G06080 71.296 7.97e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal22g0264 LOB 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0264 K13945 - gmx:100787638 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0264 22 1669366 1670680 Lal22g0264 22 1669366 1670680 ECH