Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0263 ATGGACAAGAACATAGGCAACAACAATAATCTACCAACTCCAACCAACAGCAACAACAATGCCACCGAGGACGATGAGAACAACGACCGTGACGATAACAACAACCATGGTACACCGGATCAAGGCGGCGGAAGTGGCCGCCGCCCACGAGGCAGGCCGCCGGGGTCAAAAAACAAACCCAAACCTCCGGTTGTTATAACCAAGGAGATCCCCAACGCGCTTCGGAGCCACGTGTTGGAGATCAGCAGCGGCAACGATATTGCCGAGTGCATTGCCACCTTCGCTAACCGCCGGCACCGCGGGGTTTCGGTATTGAGCGGTAGCGGAGTGGTAATTAATGTTACCCTCAGGCAACAAGCTGCACCCGGTGGGGTTATGACCCTTCATGGAAGGTTCGAGATTTTGTCATTGTCCGGTGCGTGTTTGCCTGCACCCTCGCCACCGGGTGCTACGGGGTTGACGGTCTACTTAGCCGGTGGTCAGGGTCAGGTTGTTGGCGGAACCGTGGCGGGTCCGTTGGTGGCTGCTGGACCTGTCATGGTTATAGCTGCAACTTTTGCTAATGCTACTTATGAGAGGTTGCCGCTTGAGGATGGGCCAGGTGACGAGGACATGCAATTGCAGCAGCATGAACAACAAGAAGTGAATGAAGGTGGTGATGGAACTCCTGTGTCTCAGGGTTTAGGTGAACAGCAACAACAGGTTCCAATGCCAGTGTATAATTTGAATCAAAGTTTGGTGCCACCAAATGGTCAAATTCCTCATGATGTGTTTTGGGGTGTTGCACCTCGCCCTCGCCCTCCACCTCCACCTTCTTATTGA 822 0.5353 MDKNIGNNNNLPTPTNSNNNATEDDENNDRDDNNNHGTPDQGGGSGRRPRGRPPGSKNKPKPPVVITKEIPNALRSHVLEISSGNDIAECIATFANRRHRGVSVLSGSGVVINVTLRQQAAPGGVMTLHGRFEILSLSGACLPAPSPPGATGLTVYLAGGQGQVVGGTVAGPLVAAGPVMVIAATFANATYERLPLEDGPGDEDMQLQQHEQQEVNEGGDGTPVSQGLGEQQQQVPMPVYNLNQSLVPPNGQIPHDVFWGVAPRPRPPPPPSY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0263 273 PIRSF ESCAROLA 2 273 IPR014476 GO:0003680
Lal22g0263 273 MobiDBLite consensus disorder prediction 194 235 - -
Lal22g0263 273 MobiDBLite consensus disorder prediction 211 235 - -
Lal22g0263 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 265 - -
Lal22g0263 273 Gene3D - 74 211 - -
Lal22g0263 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 265 IPR014476 GO:0003680
Lal22g0263 273 MobiDBLite consensus disorder prediction 196 210 - -
Lal22g0263 273 ProSiteProfiles PPC domain profile profile. 71 208 IPR005175 -
Lal22g0263 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 198 - -
Lal22g0263 273 MobiDBLite consensus disorder prediction 1 22 - -
Lal22g0263 273 CDD DUF296 75 186 IPR005175 -
Lal22g0263 273 MobiDBLite consensus disorder prediction 1 66 - -
Lal22g0263 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 187 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0263 Lal-Chr22 1665028 1665849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0263 47 265 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.000 4.66e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0263 - - qsu:112039774 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0263 22 1665028 1665849 Lal22g0263 22 1665028 1665849 ECH