Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0254 ATGAGCACACAACAAGGGATTGATGAAACGGTGCTAGACGACATAATCCGGCGACTCACGGAGGTTCGACCCGTAAAACGGATTAAGCTCTTCGAATCTGAGATCAAACAGCTCTGTCTTGCTTCTACAGATATCTTTCTCCAACAGCCCAATTTGCTTGAACTCCAAGCCCCCATTAAGATTTGCGGAGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGGGGTTTACCTCCTAATGCTAATTATCTCTTTTTAGGAGACTATGTGGATCGTGGGAAGCAGAGCTTAGAGACCATATGTCTTTTGCTTGCCTATAAAATCAAATATCCGGAAAACTTTTTCCTTTTGAGGGGAAATCACGAGTGTGCTTCCATTAATAGAATATATGGATTTTATGATGAATGCAAGCGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACAAACTGTTTTAACTGCCTTCCCGTGGCAGCCCTCATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCTCCTGAACTCACACACTTGGATAAAATCAAGAATTTGCCTCGTCCGATTGCTATACCGGACACTGGCTTGCTTTGTGATTTGCTTTGGTCGGATCCTGATAGGGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTCTCCTTCACCTTTGGCCTTGATAAGGTGGCTGAATTTTTGGCAAAGCATGACTTGGACCTTATCTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCCGATCGGCAACTTGTTACAATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTCAAGTCTGCAGAGAAAAAAATAAAGTCCGTGATGTCAAACAAAATGTGA 936 0.4263 MSTQQGIDETVLDDIIRRLTEVRPVKRIKLFESEIKQLCLASTDIFLQQPNLLELQAPIKICGDIHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTNCFNCLPVAALIDDKILCMHGGLSPELTHLDKIKNLPRPIAIPDTGLLCDLLWSDPDRDVKGWGMNDRGVSFTFGLDKVAEFLAKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKSAEKKIKSVMSNKM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0254 311 Pfam Calcineurin-like phosphoesterase 58 250 IPR004843 GO:0016787
Lal22g0254 311 CDD MPP_PP1_PPKL 11 297 - -
Lal22g0254 311 ProSitePatterns Serine/threonine specific protein phosphatases signature. 121 126 IPR006186 GO:0016787
Lal22g0254 311 Gene3D - 4 309 IPR029052 -
Lal22g0254 311 Pfam Serine-threonine protein phosphatase N-terminal domain 12 56 IPR031675 -
Lal22g0254 311 SUPERFAMILY Metallo-dependent phosphatases 25 303 IPR029052 -
Lal22g0254 311 SMART pp2a_7 30 300 IPR006186 GO:0016787
Lal22g0254 311 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 305 - -
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 58 85 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 87 114 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 120 144 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 154 180 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 183 210 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 240 260 IPR006186 GO:0016787
Lal22g0254 311 PRINTS Serine/threonine phosphatase family signature 262 278 IPR006186 GO:0016787
Lal22g0254 311 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0254 Lal-Chr22 1618144 1621759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0254 59 246 Calmodulin-binding Proteins AT5G63870 32.143 5.48e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0254 K06269 - gmx:100807069 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0254 22 1618144 1621759 Lal22g0254 22 1618144 1621759 ECH