Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0247 ATGGTTAAGGGTAGACAAGGAGAGCGTGTCAGACTTTATGTTCGAGGAACAATACTTGGATACAAGAGGTCAAAGTCAAATCAATACCCAAACACTTCTCTACTACAGATTGAGGGAGTAAACACTAAGGAAGAGGTTGCTTGGTATGCTGGGAAGCGTATGGCATACATTTACAAAGCCAAGGTTAAGACTAATGGAAGCCACTATCGATGCATTTGGGGAAAGGTTACTAGGCCTCATGGTAACAGTGGCATTGTCCGTGCCAAATTCAAGTCCAATTTGCCACCCAAGGATCAAGGGTTAGAGTCTTTTTGTATCCAAGCAATATATGAGATTCTGAACACCCAACGGTGCCTATGA 360 0.4306 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNTKEEVAWYAGKRMAYIYKAKVKTNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKDQGLESFCIQAIYEILNTQRCL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0247 119 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal22g0247 119 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal22g0247 119 SUPERFAMILY Translation proteins 12 100 IPR009000 -
Lal22g0247 119 Pfam Ribosomal protein L35Ae 12 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal22g0247 119 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 100 - -
Lal22g0247 119 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Lal22g0247 119 Gene3D translation elongation factor selb, chain A, domain 4 6 106 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0247 Lal-Chr22 1546862 1549731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0247 1 100 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 89.000 1.46e-64 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0247 K02917 - pop:7458094 201.83