Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0244 ATGACTGAAGAAGACCGAATCTACGCCGTACCAACCGTCCCCAATGGCGTTGCCGCCGCTGAATTTGAACCCGACGGAGGCGATGATGCTGATTTGAAAGTGGCGGGAAAAGTGAAGGGACCATGGTCTCCGGAGGAAGACGCGGTTCTCAGCCGATTGGTGGCGCAGTTCGGGGCGAGGAATTGGACCATGATAGCACGGGGAGTTCCTGGTCGTTCCGGCAAGTCTTGCCGTCTCCGGTGGTGTAATCAGTTAGACCCTTGCGTCAAACGAAAGCCTTTCACTGAGGAAGAGGACAGCCTTATAATTTCAGCCCATGCAATCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCTATCAAGAACCACTGGAATTCTACTCTAAAGCGCAGGCATGTGGAATTAGGAACACATGTCCGAACACATGCTGATGTGATGGCTGATGGTAGCTTTAAGGCATCTTCTGAAGAAACCATGTCAGTTGGGGATATGAATTCATTAAATCCTCCAGATGTCAGAAATGTTTGTATGGATAATGAAATTAAACGAAATGAAGACAACCCTCCAAAAAGAGATGGCGCTGAGGTCGAGGGACATCCTACGCTTTATCGACCAGCATCACGTATTAGTGCATTTAGTTTTTATAATCGTCCAGGCAGGCCAGCTACTGGACCATGTTCAAAGATGTTTCCATTGCAGGCCCCTTTGATCGAAGACGTAGGAGCCTGCAAGTTATTTGATGGTACTGGATGTGAGCCCATGGTTCCATTGCAATGTGGTCATGGCTGCTGTGCAGTCGACTTGAGGGGAAGCAATTCTCAGGGTTCATTATTAGGTCCTGACTTTGTTGACTATTTGGAATCTCCATCTTTCACAAGTCATGAATTGATTTCAGTAGTTACAGACTTAAACAATATAGCCTGGATCAAGAGTGGCCTTGAGAGTTATGGTGCTGGCAGAGTAACTGGGAATACTGCTACCCAAGGGTCTGCCACTTCCTCAGAAACAGGCTTCTTAGGACAAGGCCTGAAGAATGATTATATGCAATATGAGGAGGGTCCTGACAAGTTTTTGGGTGGGATGCAAGAAGTGTTATCAACGAAGATGCCTAGGCAGCATTTTGCAATGCCTGCAGAAGTTTGA 1167 0.4704 MTEEDRIYAVPTVPNGVAAAEFEPDGGDDADLKVAGKVKGPWSPEEDAVLSRLVAQFGARNWTMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDSLIISAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRHVELGTHVRTHADVMADGSFKASSEETMSVGDMNSLNPPDVRNVCMDNEIKRNEDNPPKRDGAEVEGHPTLYRPASRISAFSFYNRPGRPATGPCSKMFPLQAPLIEDVGACKLFDGTGCEPMVPLQCGHGCCAVDLRGSNSQGSLLGPDFVDYLESPSFTSHELISVVTDLNNIAWIKSGLESYGAGRVTGNTATQGSATSSETGFLGQGLKNDYMQYEEGPDKFLGGMQEVLSTKMPRQHFAMPAEV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0244 388 CDD SANT 93 136 IPR001005 -
Lal22g0244 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 85 IPR017930 -
Lal22g0244 388 SUPERFAMILY Homeodomain-like 36 132 IPR009057 -
Lal22g0244 388 Gene3D - 38 90 - -
Lal22g0244 388 ProSiteProfiles Myb-like domain profile. 39 85 IPR001005 -
Lal22g0244 388 CDD SANT 41 83 IPR001005 -
Lal22g0244 388 Gene3D - 93 139 - -
Lal22g0244 388 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Lal22g0244 388 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 31 324 - -
Lal22g0244 388 Pfam Myb-like DNA-binding domain 39 85 IPR001005 -
Lal22g0244 388 Pfam Myb-like DNA-binding domain 91 135 IPR001005 -
Lal22g0244 388 PANTHER MYB PROTEIN-RELATED 31 324 - -
Lal22g0244 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Lal22g0244 388 SMART sant 90 138 IPR001005 -
Lal22g0244 388 SMART sant 38 87 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0244 Lal-Chr22 1519041 1522542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0244 34 382 MYB Transcription Factor Family AT3G55730 44.865 3.89e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal22g0244 Myb_DNA-binding 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0244 K09422 - gmx:100781228 548.895