Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal22g0243 | ATGTTGGTCACTGAGGACAAGTCTATTGTTGTTAACATAGAAGATAATGGATGTGAAGGTTGTTGTTCTGATGAGGAACAAAGCTCCTCCCAGGATTCTGGTCCTGAGATTGTTGGAGTGTCTGAAAAAGAGAGAAGATCCTCTGTATCAGAGTGTTCAGTGGAGGTGGTGGATCTGGAAGGTACAGTATCTGATGTCAAGGTGCATCTAGCTAAGGTGGAGAGAGATTGTAGGATTTGTCATCTCAGCATGGATATGACCAACCATGAATCTGGGACCCCCATTGAGCTTGGATGTTCTTGCAAAGATGATTTAGCTGCAGCTCATAAACAGTGTGCTGAGGCTTGGTTCAAGATCAAGGGTAACAAAACATGTGAAATATGCGGATCAATTGCACTCAACGTAGCTAGTGCAAATGAATCAGTTCAAATGAATGAACAGTGGAATGAAGGAAATGATGCCTCAATCATAATATCACCACCCCCACCAGCACCAACTGTGGAAAGTGGAAGTTTCTGGAAGGGACACCGTTTTCTTAATTTCTTGCTAGCATGTATGGTCTTTGCCTTTGTCATATCATGGCTTTTTCACTTCAATGTACCCTCATGA | 609 | 0.4269 | MLVTEDKSIVVNIEDNGCEGCCSDEEQSSSQDSGPEIVGVSEKERRSSVSECSVEVVDLEGTVSDVKVHLAKVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIALNVASANESVQMNEQWNEGNDASIIISPPPPAPTVESGSFWKGHRFLNFLLACMVFAFVISWLFHFNVPS | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal22g0243 | 202 | SUPERFAMILY | RING/U-box | 74 | 130 | - | - | |
Lal22g0243 | 202 | PANTHER | ZINC FINGER, RING-CH-TYPE | 24 | 202 | - | - | |
Lal22g0243 | 202 | Pfam | RING-variant domain | 77 | 128 | IPR011016 | GO:0008270 | |
Lal22g0243 | 202 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 24 | 202 | - | - | |
Lal22g0243 | 202 | MobiDBLite | consensus disorder prediction | 22 | 45 | - | - | |
Lal22g0243 | 202 | SMART | ringv_2 | 76 | 129 | IPR011016 | GO:0008270 | |
Lal22g0243 | 202 | MobiDBLite | consensus disorder prediction | 22 | 36 | - | - | |
Lal22g0243 | 202 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 139 | IPR013083 | - | |
Lal22g0243 | 202 | CDD | RING_CH-C4HC3_MARCH | 77 | 129 | - | - | |
Lal22g0243 | 202 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 69 | 135 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal22g0243 | Lal-Chr22 | 1515215 | 1517568 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal22g0243 | 8 | 202 | C3H Transcription Factor Family | AT5G05830 | 57.949 | 4.91e-70 | 210 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal22g0243 | - | - | gmx:100818979 | 264.618 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal9g1638 | 9 | 18783854 | 18787370 | Lal22g0243 | 22 | 1515215 | 1517568 | ECH | |
Lal2g1884 | 2 | 21128523 | 21131437 | Lal22g0243 | 22 | 1515215 | 1517568 | ECH | |
Lal22g0243 | 22 | 1515215 | 1517568 | Lal22g0243 | 22 | 1515215 | 1517568 | ECH |