Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal22g0222 | ATGATGACGACCAAACCACCCTCCTCCGTCGTCACCCTCACCGTCGCCGCCGTCATCATTTTCTCTTCACTATTGCCATTTTGTCATGCTCTCGGCTCCGGCACCACTCTTGCCGTCACCGACGCATCCGCCACCGTGTGCGGCATTGTGGCGTCACACCCAATCCAACGCATTGAATGCTACCGCCGCGGCCACGTCATCGCCGTCGCCCCGAAGGTTTCATTTTCTGTCATCTCCGGCGGAAGAAACTACTTCTGCGGCCTCAGGTCCGGTAACTACAGCTTACTCTGCTGGGACACTGTCTCTTCCAACGTTACCTTTGAAAGGAGAAGACTTTACAACAATGATACTGTTCTATTCGAGAATCTTGCCGTTGGTGACACCCAAGTTTGCGCTACAGTTGTTGGTGCTGGAATGGCGTCGTGTTGGAGAACCAATAGTGCGTTTGAATTGCCATCTGAGTATGATCAATTCGCTTCTATTTCATCTGGGTCGGGTTTTTCTTGCGGAATTGTGAAGAACGGTTCGTTGGTTCGGTGTTGGGGTAATGGGTCTATTGCTAGAAAGATAGAGAGTGGATTCGGGAACATGTCTATGCTGAGTATTGTAGCTGGCGAATCACATGTTTGTGGGTTGGATTCAAATGGGTTTTTGGTATGTAGAGGGAGTAATAGTTTTGGTCAAATTGATGTTCCGAAAGGAGGGTCCTTTGATTATTCTGGGTTAGCACTTGGAGCTGAACATAGTTGTGCTATTAGGAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGTAGGGGTTTGTTCTCTGTTAATGTTACTCAAGGTGTTTCTTTTGAGACCATTGTTTCTGGCTCCAATTTTACTTGTGGATTGACAACAAGGAATTTTTCTGTTATGTGTTGGGGTCCTGGTTGGTCTAATAATGATGGTCATAGTTCTAGTCCTAGGTTTGAGCTTCCCTTGTCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTAAATGTGGTGTATATCCTGCTTCTCAAATTTTGTGTTCCGGAAATGGTAACATTTGCAAGCCACAGCCTTGTTCTCCTCAAATGCCAGTTCTACTGGCACCACCACCGCCCTTACCACCATTGGCGCAGCCACAATCCGTGCCTCCTTCCCCTTCGTTGTCGAAGGGATTGACAACAGGCTTATTGGTATTTGCCATTGTTGGATCAGTAGGAGCTGCTGCTGGCATTTGCACCATAATTTATTGCTTGTGGGCTGGTGTTTGTTTGGGGAAGAAGAAAGTCCATAATTCTGTGCAGCCAAGAATTACTAGAGGTGGCAGTTCAAATGGTGATGATAATAGCCCGCCTTCAAGATCATCCACCATTATCCGTCAGGGCTCAAGAATAATACGGCGTCAGAGGAGCGGAACATCGTCAACAAAACATACAGACAGGGCGGAGGAGTTCAACCTGGTTGAGCTTGCTTCGGCTACCAACAATTTCTCACTTGAGAACAAGATTGGTGCCGGAAGCTATGGTGTTGTTTATAGAGGCAAACTCACCGATGGTCGCGAGGTGGCGATCAAGAGGGGTGACACTGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCGTTCATGTCCCGTCTACACCACAAGCATTTGGTTAGGCTAATTGGGTACTGTGAAGAGAAAGATGAAAGGCTTTTGGTGTATGAATATATGACGAATGGGGCATTATATGATCATTTACATGACAAAAACAATGTAGACAAGAGTAGTAGTCTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCGCTGGATGCTTCACGAGGAATCGAATATCTTCATAATTATGCAGTTCCGTCTATAATTCACAGAGATATCAAGTCCTCTAATATTCTGATCGACGCAAATTGGACCGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGGCCATGATTACCAGCCTACGAAGGCAGCTGGAACGGTTGGATACATCGATCCTGAGTATTATGGTCTAAATGTTTTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTACTACTAGAACTCTTAACAGGAAAGAGAGCTATATTCAAGGATGGTGAGAATGGAGGCACCCCTGTGAGTGTTGTAAGCTATGCTGTGCCTGCAATCATGGGAGGAGAACTGTCCAAGATTCTGGACCCGAGGGTTGAACCGCCAGAGTTGAATGAAACAGAAGCGGTGGAGCTGGTGGCCTATACTGCTATGCATTGTGTAAATTTGGAAGGGAAAGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGACTTTGTGTGATACTAGTCATGGCAGCATTTCCAGCGGTACAATCTCTATTGCATCAGACTGA | 2418 | 0.4595 | MMTTKPPSSVVTLTVAAVIIFSSLLPFCHALGSGTTLAVTDASATVCGIVASHPIQRIECYRRGHVIAVAPKVSFSVISGGRNYFCGLRSGNYSLLCWDTVSSNVTFERRRLYNNDTVLFENLAVGDTQVCATVVGAGMASCWRTNSAFELPSEYDQFASISSGSGFSCGIVKNGSLVRCWGNGSIARKIESGFGNMSMLSIVAGESHVCGLDSNGFLVCRGSNSFGQIDVPKGGSFDYSGLALGAEHSCAIRRLNGSVVCWGGRGLFSVNVTQGVSFETIVSGSNFTCGLTTRNFSVMCWGPGWSNNDGHSSSPRFELPLSPILPGPCVQSSCSKCGVYPASQILCSGNGNICKPQPCSPQMPVLLAPPPPLPPLAQPQSVPPSPSLSKGLTTGLLVFAIVGSVGAAAGICTIIYCLWAGVCLGKKKVHNSVQPRITRGGSSNGDDNSPPSRSSTIIRQGSRIIRRQRSGTSSTKHTDRAEEFNLVELASATNNFSLENKIGAGSYGVVYRGKLTDGREVAIKRGDTGTKMKKFQEKESAFESELAFMSRLHHKHLVRLIGYCEEKDERLLVYEYMTNGALYDHLHDKNNVDKSSSLLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSGHDYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDGENGGTPVSVVSYAVPAIMGGELSKILDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALTLCDTSHGSISSGTISIASD | 805 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal22g0222 | 805 | Gene3D | Phosphorylase Kinase; domain 1 | 458 | 576 | - | - | |
Lal22g0222 | 805 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 627 | 639 | IPR008271 | GO:0004672|GO:0006468 | |
Lal22g0222 | 805 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 794 | - | - | |
Lal22g0222 | 805 | ProSiteProfiles | Protein kinase domain profile. | 496 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal22g0222 | 805 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 201 | 228 | - | - | |
Lal22g0222 | 805 | PANTHER | SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN | 8 | 803 | - | - | |
Lal22g0222 | 805 | SUPERFAMILY | Protein kinase-like (PK-like) | 475 | 781 | IPR011009 | - | |
Lal22g0222 | 805 | SMART | serkin_6 | 496 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal22g0222 | 805 | Gene3D | - | 190 | 365 | IPR009091 | - | |
Lal22g0222 | 805 | Gene3D | - | 28 | 189 | IPR009091 | - | |
Lal22g0222 | 805 | MobiDBLite | consensus disorder prediction | 435 | 471 | - | - | |
Lal22g0222 | 805 | ProSitePatterns | Protein kinases ATP-binding region signature. | 502 | 524 | IPR017441 | GO:0005524 | |
Lal22g0222 | 805 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 8 | 803 | IPR044815 | GO:0004674 | |
Lal22g0222 | 805 | MobiDBLite | consensus disorder prediction | 435 | 478 | - | - | |
Lal22g0222 | 805 | SUPERFAMILY | RCC1/BLIP-II | 30 | 264 | IPR009091 | - | |
Lal22g0222 | 805 | Pfam | Protein kinase domain | 497 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal22g0222 | Lal-Chr22 | 1370747 | 1373164 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal22g0222 | 11 | 805 | Receptor kinase-like Gene Family | AT3G55950 | 60.934 | 0.0 | 879 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Lal22g0222 | Pkinase | 3.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal22g0222 | - | - | gmx:100798905 | 1170.61 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal22g0222 | 22 | 1370747 | 1373164 | Lal17g1573 | 17 | 17140840 | 17143260 | ECH | |
Lal22g0222 | 22 | 1370747 | 1373164 | Lal22g0222 | 22 | 1370747 | 1373164 | ECH | |
Lal18g1373 | 18 | 16062784 | 16065183 | Lal22g0222 | 22 | 1370747 | 1373164 | LSH | |
Lal22g0222 | 22 | 1370747 | 1373164 | Lal6g0236 | 6 | 1562697 | 1565090 | LSH |