Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0221 ATGGCTGTGTCAAACGATGTGGAAGCTGTGATAGAGTTTTTGAGGAAGAATGGTCTTTCAGAGGCTGAGTCAGCACTCAGACAAGACATCATAGAGAAGCGAAGTTATCGTGATGCTGATCTGGCATCCTTTGACTATGAGAACTTCTTCTTTCCTATGGTCCCTCCTCCGCCGCCGGTCAGGCTCCGATCATCTGAACCTGCCGGAAAACTCTTCTCTGTTTCTTCCGATGATGAGTTTGTTAGCATAGGTTCATTCACTTCTCGTGTCCCTTCTTCAGAGTTCATCAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGAGTCTTCGTCAGATAGGTTATCGCAATTTGGCACAGCACGTGATTATCACGATTTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGAGTGCTTCATGACCCCTAATTTTAGAGGGCTGGATTTCTCTGGGTGTCAGGCTGGGGATAAGTTTGTCATGACAACAGAAAATGAGAATGAGTATGACCATTCTCTCGATCTTGATCACAACTATGAAGAAGTACAATTAGAGGGAAATGGTGCTTACATGGACAAGGCATGCCTTTATAATCATTCATCAGCAGCAGATGTCAATGTGACTTATAATAAAGACCATTTTGAAGGAGATCCTACAAACTTCAGCTATCCTAATTTGAAGGAAATCTATATGAACGATTTTCTCTCGGAGGTTGTTGGGGATGTTACTTCTTTTGATTCTGAATCACACCATACCGTGAATCAAAATTTTGACTACTGCACTAAAAATGACAACACTGAAGAGTACAAGGGTCCTTATGACTTAACTATCAAACTTGCTGAAATTGATCCACCAAATGGACTTGACATCTATGAAGCTCGACATGGGGGAGAACTTTCTGAAGAGTACCAAGATCCAGAGACTGCAGAAGCTGGAGAGGATAGTACTGATCATGAGCTCTTGAAGTATTTTCATGATGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAAAACAGGACGGGATTTGAAGAAAACAAGGAACTGCCCATTCTGCTAAATACAATCATTGCTGGGAGGTACTACATAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGAGTTGTTCAGGCACATGATCTTCGGACAGGAGTAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTTAATAAGCATGACCCAGTAGATGAACGCCACATATTGCGACTCTATGACTATTTCTACCATCAGGAACATTTATTTCTTGTAACCGAGCTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGAGAGGAAGCATATTTTACATTAAACAGGTTGCAGATCATTACTCGTCAATGTTTGGAAGCATTGCAGTACTTGCATAACTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTTATCAAAAATTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGGAGCAGTTGCTTTCAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATCGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCCAATGATGCAGTTGTGATGATTCTCGCACGCATGATTGGAATGTTTGGTCCTATTGACCTGGACATGTTGGTGAAAGGGCAAGAAACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTAATCAAGTGGAGTACATAATTCCAGAGGAGTCATCATTGGAGCAACATCTACAAGTTACTGATACTATGTTTATAGACTTTGTCAAATGCTTGCTTAGCATCAACCCCAAAAGAAGGCCCAGTGCAAGACAAGCATTAAAGCATCCATGGCTTTCCAATATTTACAAGTCCAAGTAG 2040 0.3971 MAVSNDVEAVIEFLRKNGLSEAESALRQDIIEKRSYRDADLASFDYENFFFPMVPPPPPVRLRSSEPAGKLFSVSSDDEFVSIGSFTSRVPSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDECFMTPNFRGLDFSGCQAGDKFVMTTENENEYDHSLDLDHNYEEVQLEGNGAYMDKACLYNHSSAADVNVTYNKDHFEGDPTNFSYPNLKEIYMNDFLSEVVGDVTSFDSESHHTVNQNFDYCTKNDNTEEYKGPYDLTIKLAEIDPPNGLDIYEARHGGELSEEYQDPETAEAGEDSTDHELLKYFHDDEYEVFDLRIIHRKNRTGFEENKELPILLNTIIAGRYYITEYLGSAAFSRVVQAHDLRTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPVDERHILRLYDYFYHQEHLFLVTELLRANLYEFQKFNQESGEEAYFTLNRLQIITRQCLEALQYLHNLGIVHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPIDLDMLVKGQETHKYFTKEYDIYYVNEETNQVEYIIPEESSLEQHLQVTDTMFIDFVKCLLSINPKRRPSARQALKHPWLSNIYKSK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0221 679 Gene3D Phosphorylase Kinase; domain 1 365 451 - -
Lal22g0221 679 SUPERFAMILY Protein kinase-like (PK-like) 360 677 IPR011009 -
Lal22g0221 679 CDD PKc_DYRK_like 370 672 - -
Lal22g0221 679 Pfam Protein kinase domain 372 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0221 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Lal22g0221 679 ProSiteProfiles Protein kinase domain profile. 370 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0221 679 SMART serkin_6 370 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0221 679 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 676 - -
Lal22g0221 679 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 676 - -
Lal22g0221 679 MobiDBLite consensus disorder prediction 99 118 - -
Lal22g0221 679 Gene3D Transferase(Phosphotransferase) domain 1 424 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0221 Lal-Chr22 1360074 1364279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0221 367 677 MAP Kinase Gene Family AT5G19010 31.118 1.18e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal22g0221 Pkinase 3.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0221 - - gmx:100783988 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0221 22 1360074 1364279 Lal22g0221 22 1360074 1364279 ECH
Lal18g1376 18 16074365 16079341 Lal22g0221 22 1360074 1364279 LSH