Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal22g0221 | ATGGCTGTGTCAAACGATGTGGAAGCTGTGATAGAGTTTTTGAGGAAGAATGGTCTTTCAGAGGCTGAGTCAGCACTCAGACAAGACATCATAGAGAAGCGAAGTTATCGTGATGCTGATCTGGCATCCTTTGACTATGAGAACTTCTTCTTTCCTATGGTCCCTCCTCCGCCGCCGGTCAGGCTCCGATCATCTGAACCTGCCGGAAAACTCTTCTCTGTTTCTTCCGATGATGAGTTTGTTAGCATAGGTTCATTCACTTCTCGTGTCCCTTCTTCAGAGTTCATCAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGAGTCTTCGTCAGATAGGTTATCGCAATTTGGCACAGCACGTGATTATCACGATTTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGAGTGCTTCATGACCCCTAATTTTAGAGGGCTGGATTTCTCTGGGTGTCAGGCTGGGGATAAGTTTGTCATGACAACAGAAAATGAGAATGAGTATGACCATTCTCTCGATCTTGATCACAACTATGAAGAAGTACAATTAGAGGGAAATGGTGCTTACATGGACAAGGCATGCCTTTATAATCATTCATCAGCAGCAGATGTCAATGTGACTTATAATAAAGACCATTTTGAAGGAGATCCTACAAACTTCAGCTATCCTAATTTGAAGGAAATCTATATGAACGATTTTCTCTCGGAGGTTGTTGGGGATGTTACTTCTTTTGATTCTGAATCACACCATACCGTGAATCAAAATTTTGACTACTGCACTAAAAATGACAACACTGAAGAGTACAAGGGTCCTTATGACTTAACTATCAAACTTGCTGAAATTGATCCACCAAATGGACTTGACATCTATGAAGCTCGACATGGGGGAGAACTTTCTGAAGAGTACCAAGATCCAGAGACTGCAGAAGCTGGAGAGGATAGTACTGATCATGAGCTCTTGAAGTATTTTCATGATGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAAAACAGGACGGGATTTGAAGAAAACAAGGAACTGCCCATTCTGCTAAATACAATCATTGCTGGGAGGTACTACATAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGAGTTGTTCAGGCACATGATCTTCGGACAGGAGTAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTTAATAAGCATGACCCAGTAGATGAACGCCACATATTGCGACTCTATGACTATTTCTACCATCAGGAACATTTATTTCTTGTAACCGAGCTTCTGCGTGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGAGAGGAAGCATATTTTACATTAAACAGGTTGCAGATCATTACTCGTCAATGTTTGGAAGCATTGCAGTACTTGCATAACTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTTATCAAAAATTACAAAAGATGTGAGATAAAGGTTATTGATCTTGGGAGCAGTTGCTTTCAAACAGACAATCTGTGCCTATATGTACAATCCCGATCCTATCGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCCAATGATGCAGTTGTGATGATTCTCGCACGCATGATTGGAATGTTTGGTCCTATTGACCTGGACATGTTGGTGAAAGGGCAAGAAACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTAAATGAGGAGACTAATCAAGTGGAGTACATAATTCCAGAGGAGTCATCATTGGAGCAACATCTACAAGTTACTGATACTATGTTTATAGACTTTGTCAAATGCTTGCTTAGCATCAACCCCAAAAGAAGGCCCAGTGCAAGACAAGCATTAAAGCATCCATGGCTTTCCAATATTTACAAGTCCAAGTAG | 2040 | 0.3971 | MAVSNDVEAVIEFLRKNGLSEAESALRQDIIEKRSYRDADLASFDYENFFFPMVPPPPPVRLRSSEPAGKLFSVSSDDEFVSIGSFTSRVPSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDECFMTPNFRGLDFSGCQAGDKFVMTTENENEYDHSLDLDHNYEEVQLEGNGAYMDKACLYNHSSAADVNVTYNKDHFEGDPTNFSYPNLKEIYMNDFLSEVVGDVTSFDSESHHTVNQNFDYCTKNDNTEEYKGPYDLTIKLAEIDPPNGLDIYEARHGGELSEEYQDPETAEAGEDSTDHELLKYFHDDEYEVFDLRIIHRKNRTGFEENKELPILLNTIIAGRYYITEYLGSAAFSRVVQAHDLRTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPVDERHILRLYDYFYHQEHLFLVTELLRANLYEFQKFNQESGEEAYFTLNRLQIITRQCLEALQYLHNLGIVHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPIDLDMLVKGQETHKYFTKEYDIYYVNEETNQVEYIIPEESSLEQHLQVTDTMFIDFVKCLLSINPKRRPSARQALKHPWLSNIYKSK | 679 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal22g0221 | 679 | Gene3D | Phosphorylase Kinase; domain 1 | 365 | 451 | - | - | |
Lal22g0221 | 679 | SUPERFAMILY | Protein kinase-like (PK-like) | 360 | 677 | IPR011009 | - | |
Lal22g0221 | 679 | CDD | PKc_DYRK_like | 370 | 672 | - | - | |
Lal22g0221 | 679 | Pfam | Protein kinase domain | 372 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal22g0221 | 679 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 496 | 508 | IPR008271 | GO:0004672|GO:0006468 | |
Lal22g0221 | 679 | ProSiteProfiles | Protein kinase domain profile. | 370 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal22g0221 | 679 | SMART | serkin_6 | 370 | 672 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal22g0221 | 679 | PANTHER | DUAL SPECIFICITY PROTEIN KINASE | 8 | 676 | - | - | |
Lal22g0221 | 679 | PANTHER | HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED | 8 | 676 | - | - | |
Lal22g0221 | 679 | MobiDBLite | consensus disorder prediction | 99 | 118 | - | - | |
Lal22g0221 | 679 | Gene3D | Transferase(Phosphotransferase) domain 1 | 424 | 672 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal22g0221 | Lal-Chr22 | 1360074 | 1364279 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal22g0221 | 367 | 677 | MAP Kinase Gene Family | AT5G19010 | 31.118 | 1.18e-33 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_DYRK-PRP4 | Lal22g0221 | Pkinase | 3.5e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal22g0221 | - | - | gmx:100783988 | 1056.59 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal22g0221 | 22 | 1360074 | 1364279 | Lal22g0221 | 22 | 1360074 | 1364279 | ECH | |
Lal18g1376 | 18 | 16074365 | 16079341 | Lal22g0221 | 22 | 1360074 | 1364279 | LSH |